Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099195.1_202017-02-
08] 2,159 sequences; 11,597,758 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1109 118 9e-22
seq873 82.4 6e-11
>seq1109
Length=26950
Score = 118 bits (130), Expect = 9e-22
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 26731 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 26672
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 26671 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 26612
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || || | ||||
Sbjct 26611 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 26554
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||||||| | ||| || || |||||||||||
Sbjct 26553 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 26516
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
|||||||| |||||||| |||| ||| || |||| || |||||||||||| | |
Sbjct 26934 TCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAG 26875
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| || | ||| ||||| || | || |||||||||| |||||| ||| |
Sbjct 26874 ATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTA 26815
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| || || |||| || || ||| | || |||||||||||||| | ||| || |||
Sbjct 26814 TCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACA 26755
Query 48716 AAAATCTGCAT 48726
|| ||||||||
Sbjct 26754 AAGATCTGCAT 26744
>seq873
Length=23011
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | |||||| || || | ||||| ||| |||||||||||| ||||| || |
Sbjct 22622 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 22681
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | || || || ||||||||| | |||| || | ||||| || ||
Sbjct 22682 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 22741
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || ||||||||| ||||||| ||| | | || || || | ||| ||
Sbjct 22742 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 22801
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | ||||| || ||||| || || || || |||||||| |||||
Sbjct 22802 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 22849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421240115696159
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |