Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099195.1_202017-02- 08] 2,159 sequences; 11,597,758 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1109 100 3e-16 seq873 91.5 1e-13 seq763 89.7 5e-13 >seq1109 Length=26950 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||||| | | |||||||| ||||||||||| || || || | ||| || || || Sbjct 26719 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 26660 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| ||| Sbjct 26659 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT-TGAATTT 26601 Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 | | |||| |||| | | ||| |||| || || || || | || | |||||||| Sbjct 26600 TCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 26542 Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| || || ||||||||||| Sbjct 26541 GTCAAAGTCTTGACGAAAATCTGCAT 26516 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| ||||||||||| || || | ||| || || || ||||||| | Sbjct 26937 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCA 26878 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | |||||| || ||||| |||||||| ||||| |||||| || | Sbjct 26877 AAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACG 26818 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| || || ||||| | || | |||||||| |||| ||| || Sbjct 26817 TTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTA 26758 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 26757 ACAAAGATCTGCAT 26744 >seq873 Length=23011 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||| |||||||| || || | || || ||||| ||||||| | Sbjct 22656 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCA 22715 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | | || ||||| ||||| |||||||| ||||| ||| |||| | |||| Sbjct 22716 AAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACTTAAC 22774 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | || || ||||| | || | || ||||| ||||| || | Sbjct 22775 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 22833 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||| ||||| Sbjct 22834 TGACAAAAATTTGCAT 22849 >seq763 Length=114449 Score = 89.7 bits (98), Expect = 5e-13 Identities = 311/482 (65%), Gaps = 10/482 (2%) Strand=Plus/Minus Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 ||||| ||| |||| |||| || || ||||| | || | ||||| ||||| ||| Sbjct 86303 GGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 86244 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | |||||| || | || || || |||||| | | || | | ||||||| Sbjct 86243 ATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCC 86184 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 |||| | | ||| | ||||||||||| ||| | ||||| | || | || ||| Sbjct 86183 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTAGAAGCTGGA 86124 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 || |||| ||| || | || || |||||||| ||| ||| || || || Sbjct 86123 GAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGA 86064 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386 | ||| ||| || |||||| ||||||||| || ||| |||||||| || Sbjct 86063 GTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATTCA 86004 Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446 | || | |||| || || | | | ||||||| |||||||| ||| | | || ||| Sbjct 86003 AAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGT 85944 Query 153447 CGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGA 153501 | ||||||| | ||| | | |||||| | | ||||||| ||| || |||| Sbjct 85943 CTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTCGA 85889 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 ||| | |||| | |||| | | ||||||| ||| | | | | ||||||||| || Sbjct 85888 TAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATTAT 85829 Query 153562 AG 153563 || Sbjct 85828 AG 85827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496249007118480