Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099195.1_202017-02- 08] 2,159 sequences; 11,597,758 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq873 127 1e-24 seq1109 82.4 5e-11 >seq873 Length=23011 Score = 127 bits (140), Expect = 1e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || | Sbjct 22615 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 22674 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 ||||||| || | | |||| || |||||||| ||||| || |||| || |||||||| Sbjct 22675 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 22734 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | || |||||||| | ||||| || ||| | || | ||| | Sbjct 22735 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 22794 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| ||||| || || || ||||| ||||| || ||||| Sbjct 22795 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 22849 >seq1109 Length=26950 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/235 (68%), Gaps = 10/235 (4%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || || | ||| || || || || | |||| ||||||||||||||| || || || Sbjct 26742 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 26683 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || || || ||||| ||||| ||||||| || ||| || ||| | || Sbjct 26682 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 26623 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925 | || |||||||| | ||||| || ||| |||| ||||| || | Sbjct 26622 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT-----T 26568 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | || || | |||||||| || || || | ||||| || || |||||||| || Sbjct 26567 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 26513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325684230106421