Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02-
08] 570 sequences; 11,326,697 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq542 122 8e-23
seq46 89.7 5e-13
>seq542
Length=31390
Score = 122 bits (134), Expect = 8e-23
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
||||| | ||||| ||| |||||||| |||||||||||||| || || | |||
Sbjct 214 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 273
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
||||||||||| || || |||| || | || || || |||||||| ||||| |||||
Sbjct 274 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 333
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
|||||| ||| | | || | ||||||| || || | || | || | ||||
Sbjct 334 TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTT 393
Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATT 131242
|||||||| | ||| || |||||||||||||| | ||||
Sbjct 394 TTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATT 433
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || |||||||| |||||||| || || ||| | ||| ||||||||||| ||
Sbjct 1 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 60
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| || | ||| || || |||||||| ||||| ||||| ||||||| |||
Sbjct 61 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 120
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || |||| ||| || | || | || | |||||||||||| | |||
Sbjct 121 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 180
Query 131218 TTTACGAAAATCTGCAT 131234
|| || || ||||||||
Sbjct 181 TTAACAAAGATCTGCAT 197
>seq46
Length=350
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || |||||||| |||||||| || || ||| | || ||||| ||||| ||
Sbjct 350 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 291
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| | || || | ||| || ||||||||||| |||||||| || ||||| |||
Sbjct 290 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTG 231
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||| |||| || || | || | ||| | || || || |||||||||
Sbjct 230 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 171
Query 131218 TTTACGAAAATCTGCAT 131234
|| |||||||| |||||
Sbjct 170 TTGACGAAAATTTGCAT 154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009436908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |