Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02-
08] 570 sequences; 11,326,697 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq209 105 6e-18
seq46 86.0 5e-12
seq166 82.4 6e-11
>seq209
Length=184469
Score = 105 bits (116), Expect = 6e-18
Identities = 161/230 (70%), Gaps = 5/230 (2%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || || || ||||| ||||| || |||||| ||| ||| ||
Sbjct 8431 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8490
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || ||||| || ||| ||||| || || | || ||
Sbjct 8491 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8550
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || || ||||| | || |||| || |||| ||
Sbjct 8551 CAACAAAGATTGATCTTTGCTGGTAAGCAATTN-----TGGTAGAACTTTGTCCGACTAC 8605
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||||||||| ||| |||| || ||||| |||| ||
Sbjct 8606 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8655
>seq46
Length=350
Score = 86.0 bits (94), Expect = 5e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 28667 AGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 28726
||||||||| ||| | || ||||| || || ||| ||||||| || ||| || | ||
Sbjct 39 AGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGA 98
Query 28727 TTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||||||| ||||| ||||| |||| |||| || ||||| |||| || ||
Sbjct 99 TTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 155
>seq166
Length=185121
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 28677 AGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATT 28736
||| | |||||||| || || ||||||||||| || ||| || | || || ||||||
Sbjct 135276 AGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATT 135217
Query 28737 CAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||||||||| ||| ||||| | || || ||||| |||| || || ||
Sbjct 135216 CAAAAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 135167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425401844766030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |