Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02-
08] 570 sequences; 11,326,697 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq209 125 1e-23
seq46 122 2e-22
seq542 118 2e-21
seq139 116 7e-21
>seq209
Length=184469
Score = 125 bits (138), Expect = 1e-23
Identities = 173/239 (72%), Gaps = 5/239 (2%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || |||| ||||| || || || ||
Sbjct 8664 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTG 8605
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | | || ||||| ||||||||||| || ||||| ||||||
Sbjct 8604 TAGTCGGACAAAGTTC-TAC--CAN--AATTGCTTACCAGCAAAGATCAATCTTTGTTGG 8550
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 8549 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAA 8490
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 8489 GATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8431
>seq46
Length=350
Score = 122 bits (134), Expect = 2e-22
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || | ||| |||||||||||||| ||||||||||| || || || || |||||||||
Sbjct 308 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 249
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| |||||| |||| || || ||||| || || ||||| || ||||| || ||
Sbjct 248 TCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATA 189
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || |||| ||||| | ||| || |||||
Sbjct 188 GTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 154
Score = 105 bits (116), Expect = 1e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||| || |||| |||||| ||| ||||||||
Sbjct 155 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 96
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| |||| ||| ||||| |||||||| ||||| ||||| || ||
Sbjct 95 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 36
Query 171960 GGTATTCCTTCTTTATCTTGTATTTT 171985
|| || ||||| || ||||| |||||
Sbjct 35 GGAATACCTTCCTTGTCTTGAATTTT 10
>seq542
Length=31390
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || | || || | |||||| || | ||| || ||| || |||||
Sbjct 196 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 255
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| || | || ||||| ||||| || ||||| ||||| || ||
Sbjct 256 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 315
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| || || || || ||||| || |||||
Sbjct 316 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 375
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | || ||||||||||| || || || || | ||| ||||||||
Sbjct 376 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 425
Score = 95.1 bits (104), Expect = 2e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972
|||| || | || ||||| ||||| || || |||||||| || || || || ||||| |
Sbjct 41 CGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCT 100
Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032
| || || ||||| || || ||| || || || || ||||| || |||| ||| |
Sbjct 101 TGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGA 160
Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||||||||| || || || |||| || ||||||||
Sbjct 161 TGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 197
>seq139
Length=37940
Score = 116 bits (128), Expect = 7e-21
Identities = 334/505 (66%), Gaps = 13/505 (3%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||||||| | |||||||| ||||| || || || | || || ||
Sbjct 37789 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 37730
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AA 38950
| ||| ||||| || || |||| | || || ||||| | | || | | | | ||
Sbjct 37729 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT-TGTTACCGAAAGCGACCAA 37671
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
| ||| ||||| || || ||||| ||||| |||||| ||| |||||||| | ||
Sbjct 37670 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 37611
Query 39011 TTTAAATGGTAATGCATCATCAATAAAT-TCttt-ttctatttctacagcttgtttaatt 39068
|| |||||| || || ||| || | ||||| ||| ||||| ||||| | | |
Sbjct 37610 AGCAACTGGTAAGGCGTC--CAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 37553
Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126
|| | || | || | | | ||| | || | ||| || | | || |
Sbjct 37552 ATTTT--TTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATGG---GCGAACAACAAGC 37498
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
||||||| || || || ||||||||||| ||| | || ||||| || ||| ||||| |
Sbjct 37497 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 37438
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
| ||||| | ||||||||||| | ||| || || || ||||| || || || || |
Sbjct 37437 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 37378
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
||| || | | ||||| || | || |||| | ||||||| | | | ||| ||
Sbjct 37377 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAA 37318
Query 39307 TCCAATTTATGGCCCAATCTGCTTT 39331
|||| ||| ||||| || || ||
Sbjct 37317 TCCATCTTAAAGCCCATTCGGCCTT 37293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905129550906000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |