Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099265.1_202017-02-
08] 675 sequences; 11,390,279 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq296 161 2e-34
seq370 150 4e-31
seq629 147 5e-30
seq73 93.3 9e-14
>seq296
Length=30463
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 30260 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 30201
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || ||
Sbjct 30200 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 30141
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 30140 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 30081
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 30080 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 30039
Score = 111 bits (122), Expect = 3e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
|| || || ||||| || ||||| || | |||| ||||| || ||||| |||||||||||
Sbjct 30463 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACC 30405
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|| ||||| | | ||||| |||||||| || ||||| ||||| || ||||| |||
Sbjct 30404 GGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTT 30345
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
||||| || || ||||| || ||| || || | || | || || || ||||||||
Sbjct 30344 AACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGT 30285
Query 195123 TTTTACGAACACTTGCAT 195140
|| || || | |||||
Sbjct 30284 CTTAACAAAGATCTGCAT 30267
>seq370
Length=44060
Score = 150 bits (166), Expect = 4e-31
Identities = 112/131 (85%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| |||||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 140 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 81
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || |||||||| || || || | || ||| |||||||||||||| ||||| |||
Sbjct 80 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 21
Query 195046 TCTTGAATTTT 195056
|||||||||||
Sbjct 20 TCTTGAATTTT 10
>seq629
Length=350
Score = 147 bits (162), Expect = 5e-30
Identities = 153/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
|| || || ||||| || ||||| || | |||| ||||| |||||||| || ||||||||
Sbjct 350 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACC 292
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|| || || | || ||||| || ||||| || |||||||| ||||||||||| ||
Sbjct 291 AGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTT 232
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|||||| ||||| ||||| ||| ||| || || ||||| | ||||| ||||| | |||
Sbjct 231 GACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGT 172
Query 195123 TTTTACGAACACTTGCAT 195140
||| ||||| | ||||||
Sbjct 171 TTTGACGAAAATTTGCAT 154
Score = 114 bits (126), Expect = 3e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | || |||||||| ||||| || ||||| | || ||
Sbjct 147 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 88
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | || |||||| ||||||||||| ||
Sbjct 87 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 28
Query 195039 TTCTTTGTCTTGAATTTT 195056
||| ||||||||||||||
Sbjct 27 TTCCTTGTCTTGAATTTT 10
>seq73
Length=188
Score = 93.3 bits (102), Expect = 9e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 195025 TCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAA 195084
||||||||||| ||||| |||||||||||||| ||| ||||| || || ||||| |||
Sbjct 1 TCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAA 60
Query 195085 CTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | ||||| ||||||| || || || || | ||||||
Sbjct 61 GATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109472004717725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |