Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099265.1_202017-02- 08] 675 sequences; 11,390,279 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq629 141 2e-28 seq459 102 2e-16 >seq629 Length=350 Score = 141 bits (156), Expect = 2e-28 Identities = 150/195 (77%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || ||| Sbjct 157 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 216 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||||||| || ||||| || |||||||| ||||||||||| || || Sbjct 217 ACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAG 276 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || || || |||||||| || || |||| | || || ||| | Sbjct 277 AGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 335 Query 178103 CCAAAAAGAATCAAC 178117 |||||| ||||| || Sbjct 336 CCAAAAGGAATCTAC 350 >seq459 Length=185024 Score = 102 bits (112), Expect = 2e-16 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCC-TCGAGGTGGAAAGCTCAGA 177982 ||||||||||| || ||| | || || || || || |||| | || || ||| || || Sbjct 176583 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCNTGGAAGTTGAATCTTCTGA 176524 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||| || || || ||||| ||||| || ||||| ||||| || ||||| || Sbjct 176523 CACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTAT-----TNGACCAACA 176469 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 | || | ||||| || || || || | |||||||| || ||| | |||| || ||| | Sbjct 176468 AAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACAT 176409 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || || || | || |||||| | ||| Sbjct 176408 CCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 176369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203720789605950