Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099275.1_202017-02-
08] 1,218 sequences; 11,507,064 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq667 113 3e-20
seq63 107 1e-18
>seq667
Length=31584
Score = 113 bits (124), Expect = 3e-20
Identities = 166/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| || || | |||||||| || |
Sbjct 435 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 376
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 375 GATACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 317
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATT 23785
||| | || || |||||||| || || || ||||||| ||||| | | ||||
Sbjct 316 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCT----GATT 261
Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||||| || || |||||||| |||||| | || ||||| | |||| ||
Sbjct 260 ACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 209
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||| || | || || ||||| |||||| | || ||||| ||| |
Sbjct 207 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 148
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || |||| | |||| | ||||| |||||| | || ||||||||
Sbjct 147 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 89
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || |||||||| || || || ||||||| | || || || |||||
Sbjct 88 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 29
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| || || ||
Sbjct 28 CATCCAAAAGGAATCTAC 11
>seq63
Length=220
Score = 107 bits (118), Expect = 1e-18
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 23647 ATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGAC 23706
|| || || || ||||| || | |||||| |||| | | ||| |||||| |||
Sbjct 2 ATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAAATTCAAGAC 61
Query 23707 AAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC 23766
|| |||||| | || ||||||||||| | || || |||||||| || ||||||||||||
Sbjct 62 AAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGAC 121
Query 23767 ----GAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|||||| | | ||||| ||||| || |||||||| || || ||||| || ||
Sbjct 122 GGTAGAACGCTGTCT----GATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTT 177
Query 23823 AAGGTTGCGAGGAGG 23837
|| ||| |||| ||
Sbjct 178 GAGATTGAGAGGTGG 192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338004582458744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |