Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099275.1_202017-02-
08] 1,218 sequences; 11,507,064 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq542 203 3e-47
>seq542
Length=49553
Score = 203 bits (224), Expect = 3e-47
Identities = 563/855 (66%), Gaps = 24/855 (3%)
Strand=Plus/Minus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| ||
Sbjct 26254 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 26195
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || |||||||| ||||| || || || | ||||| | ||| ||
Sbjct 26194 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 26135
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| | ||| || | || || ||| || || || || | || ||| |||| | ||
Sbjct 26134 TTACCGAA-AGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 26076
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || |||| |||| ||| || | | ||||| ||
Sbjct 26075 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 26019
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 26018 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 25959
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| ||||| || || ||||| || ||||||||||||||||| | |||| ||||||
Sbjct 25958 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 25899
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| ||
Sbjct 25898 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 25839
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || || || | ||||| | || |||||| || |||| || || ||| ||
Sbjct 25838 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 25779
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| |||| ||||| | || |||| | || || ||
Sbjct 25778 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGAT 25722
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| || | ||||| | || ||||| ||
Sbjct 25721 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAAGTATC 25665
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | | | || ||||||| || |||||||| || || || || ||||| ||
Sbjct 25664 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 25605
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| | ||| |||||| | | || |||| || |||||||| || ||
Sbjct 25604 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 25545
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| || || || | ||||
Sbjct 25544 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTC 25485
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||||| | | ||| |||| ||||||| ||||||| | |||||
Sbjct 25484 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 25425
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 25424 GAAAGAAGCTTCGGC 25410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427043260715594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |