Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq888 114 2e-20
seq474 113 7e-20
seq852 111 2e-19
seq693 100 4e-16
seq445 91.5 2e-13
>seq888
Length=220
Score = 114 bits (126), Expect = 2e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 124574 TATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGA 124633
|||||| ||||| ||||| | || || ||| || | ||| |||||||||||
Sbjct 1 TATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAAATTCAAGA 60
Query 124634 TAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGA 124693
|| |||||||| || || ||||||||||| | |||||||| || || ||| | || ||
Sbjct 61 CAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGA 120
Query 124694 TAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753
|| |||| | |||||||| ||||| ||||| || || ||||||||||| || |
Sbjct 121 CGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAG 180
Query 124754 TTTACGAGGTGGTATTAAAAATT 124776
|| |||||||||| ||| ||
Sbjct 181 ATTGAGAGGTGGTATGCAAATTT 203
>seq474
Length=24738
Score = 113 bits (124), Expect = 7e-20
Identities = 359/556 (65%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 4042 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCA 4101
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 4102 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 4161
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||||||
Sbjct 4162 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGG 4220
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 4221 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 4280
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || || ||
Sbjct 4281 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGG 4340
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 4341 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 4400
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | |||| ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 4401 GGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 4460
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 4461 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 4519
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATATTTTAATGATC 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 4520 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 4579
Query 205832 CATTTTCATCCCAAAT 205847
|||| | ||||||||
Sbjct 4580 CATTACCGTCCCAAAT 4595
>seq852
Length=23035
Score = 111 bits (122), Expect = 2e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
|||||||| ||||| || |||||||| ||||| ||||| | ||| || ||| ||
Sbjct 178 AAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAAC 237
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| || |||||||||||| || |||||||| || || || || ||||| | ||||||
Sbjct 238 GTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTT 297
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||| |||| ||| || |||| | || || ||||||||||| || ||
Sbjct 298 GCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTCC 357
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
||| | || | || || | || | |||||||
Sbjct 358 ACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 391
Score = 95.1 bits (104), Expect = 2e-14
Identities = 124/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 124574 TATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGA 124633
|||||| ||||| ||||| | || || ||| || | ||| || ||||||||
Sbjct 1 TATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAGATTCAAGA 60
Query 124634 TAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGA 124693
|||||||||||| || || |||||||| || | |||||||| || || ||| |||| ||
Sbjct 61 TAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGA 120
Query 124694 TAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTG 124745
| || |||| || || || || || ||||| ||||| ||| | || |||
Sbjct 121 TGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTG 172
>seq693
Length=293144
Score = 100 bits (110), Expect = 4e-16
Identities = 158/224 (71%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 249770 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 249711
Query 124608 TCTAATTTAAAACAGAAAATT--CAAGATAAAGAAGGTATACCACC-TGATCAACAAAGG 124664
||| | || || ||| ||||| || |||||||| ||||| ||| ||||||||
Sbjct 249710 GACAATGTCAAGTCAAAGATTNNCAAGACAAGGAAGGTATCCCACCNTGACCAACAAAGA 249651
Query 124665 CTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAA 124724
| || ||||| || || ||||| || || || |||| || || || || ||||||
Sbjct 249650 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 249591
Query 124725 AAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| |||||||| || || || | || ||||||||||
Sbjct 249590 AAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 249547
>seq445
Length=31504
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 435 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 376
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 375 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 316
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 315 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 256
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || || ||| | || || | || ||||||||||
Sbjct 255 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTAT 206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755447416131200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |