Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq693 84.2 2e-11 seq445 82.4 8e-11 >seq693 Length=293144 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| ||||| || | || ||||||||||| |||||||| || | Sbjct 249550 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 249609 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATC-GGGAGG 143076 | || || |||||| | ||| ||||||||| |||||| | ||| || || || || Sbjct 249610 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCANGGTGG 249669 Query 143077 TATGCCTTCTTTGTC--GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| ||||| | ||| ||| || | | || | ||||| | | ||| Sbjct 249670 GATACCTTCCTTGTCTTGNNAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 249729 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175 ||||| | ||| | ||||| || ||||| || || || || Sbjct 249730 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 249770 >seq445 Length=31504 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || || ||||||||||| || || || |||||| || || ||||| Sbjct 239 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 298 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| || Sbjct 299 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 358 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || || | | ||| ||||| | || | || || |||||||| || Sbjct 359 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 418 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 419 TTGACGAAAATCTGCATA 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507008639048880