Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq562 141 8e-29 seq445 134 1e-26 seq693 122 7e-23 seq398 100 2e-16 seq888 98.7 8e-16 >seq562 Length=104585 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || |||||||||||||| || | || || ||||| ||| | Sbjct 93500 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 93441 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || || ||||||||||| ||||||||||| || Sbjct 93440 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 93381 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || ||| | || | ||||| ||| Sbjct 93380 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 93321 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| ||||| || |||| || || ||| ||||| | || ||| Sbjct 93320 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 93270 >seq445 Length=31504 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | || Sbjct 435 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 376 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||||||||||||||||| ||||| || || |||||| Sbjct 375 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 316 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || ||| |||| || | || | || ||||||||| Sbjct 315 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 256 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| || || |||||| ||||| Sbjct 255 ATTCAGAAGGAGTCCACCTTACAT 232 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || || Sbjct 207 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 148 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || |||||||| ||||| || || |||||| Sbjct 147 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 88 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| |||| || | ||| | || || |||||| Sbjct 87 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 28 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 27 ATCCAAAAGGAATCTAC 11 >seq693 Length=293144 Score = 122 bits (134), Expect = 7e-23 Identities = 162/223 (73%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || ||||| || ||||| || ||||| | ||||| ||| | | || || | Sbjct 249771 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 249712 Query 22287 GGACGATATCAAACAAAAAATT--CAAGACAAGGAGGGTATTCCACCC-GATCAACAACG 22343 ||| || |||| ||| ||| ||||||||||| ||||| ||||| || |||||| | Sbjct 249711 TGACAATGTCAAGTCAAAGATTNNCAAGACAAGGAAGGTATCCCACCNTGACCAACAAAG 249652 Query 22344 TCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCA 22403 | || ||||| || || || || || || | ||| | || || ||||||||||| Sbjct 249651 ATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCA 249592 Query 22404 AAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||| | || ||||| ||| ||||| | || ||| Sbjct 249591 AAAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 249549 >seq398 Length=66313 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || ||||| ||||| || ||||| || ||||| | ||||| ||| | | || ||| | Sbjct 28967 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 29026 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 || || |||| || || ||||||||||| ||||| ||||| || |||||| | | Sbjct 29027 GATAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 29086 Query 22348 ATATTTGCCGG-CAAACAGTTAGAGGATCACCGCACC-GTCTCCGATTACAACATTCAAA 22405 || ||||| || || || || || || | || | || || |||||||| |||| Sbjct 29087 ATCTTTGCTGGTNAAGCAATTGGAAGACGGTAGAACNTCTATCTGACTACAACATCCAAA 29146 Query 22406 AAGAATCCACCATACATTTAGTTTTGCGATT 22436 | |||||||| ||||||| || ||| |||| Sbjct 29147 AGGAATCCACTTTACATTTGGTCTTGAGATT 29177 >seq888 Length=220 Score = 98.7 bits (108), Expect = 8e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || || || || ||| | |||| || | ||| | ||||| ||||||||||||||| Sbjct 5 ACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAG 64 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 || |||||||| || ||||||||| | | || |||||||| || || | || || Sbjct 65 GAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGT 124 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTG 22437 | || | || ||||| |||||||| ||||| || || | ||||| || ||| ||||| Sbjct 125 AGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTG 184 Query 22438 CGCGGAGGT 22446 | || ||| Sbjct 185 AGAGGTGGT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723350069585