Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq445 179 7e-40
seq562 178 2e-39
seq398 154 3e-32
seq693 147 4e-30
seq852 141 2e-28
seq888 125 1e-23
>seq445
Length=31504
Score = 179 bits (198), Expect = 7e-40
Identities = 172/218 (79%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| |||||||| || || ||||| ||||| || || || || || |||||||
Sbjct 228 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 287
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || | ||||||||| || || || || ||||||||||||||||
Sbjct 288 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 347
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| |
Sbjct 348 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 407
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
| || | ||||||||||| |||||||| || ||||||
Sbjct 408 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 444
Score = 140 bits (154), Expect = 6e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314
|||||| || || || || ||||||||||| || || || | || || || |||||||
Sbjct 1 CAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAG 60
Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374
|||||| ||||| || || | || ||||| || || || || ||||||||||| || ||
Sbjct 61 CTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGAT 120
Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCC 68434
|| | ||| ||| ||||| ||||| | ||||| || || || ||||||||||| ||
Sbjct 121 TTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACC 180
Query 68435 CGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || ||||||||
Sbjct 181 GGTCAAAGTCTTAACAAAGATCTGCAT 207
>seq562
Length=104585
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 93285 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 93344
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 93345 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 93404
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || ||
Sbjct 93405 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 93464
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 93465 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 93497
>seq398
Length=66313
Score = 154 bits (170), Expect = 3e-32
Identities = 159/206 (77%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAG-TGTCCTCCCAT 68307
||| ||||| |||| ||||| || ||||||||||| || || || || || || || |
Sbjct 29172 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGANGTTCTACCGT 29113
Query 68308 CTTCTAACTGCTTC-CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366
|||| || ||||| || || || || | |||||||||||| ||||| || |||||||||
Sbjct 29112 CTTCCAATTGCTTNACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 29053
Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426
||||| ||||| | |||||| || |||||||| | ||||| |||||||| ||||||
Sbjct 29052 TCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 28993
Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || || | ||||| |||||
Sbjct 28992 GTCTTACCAGTCAAAGTCTTAACGAA 28967
>seq693
Length=293144
Score = 147 bits (162), Expect = 4e-30
Identities = 158/207 (76%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| | ||||| |||||||| ||||| || || || | || || || ||
Sbjct 249564 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 249623
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC-GGGTGGAATGCCTTCCTTGT 68367
||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||
Sbjct 249624 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCANGGTGGGATACCTTCCTTGT 249683
Query 68368 CTTG--AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
|||| |||||||| |||||| || || ||||| | ||||| |||||||| |||||
Sbjct 249684 CTTGNNAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 249743
Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAA 68452
||| || || || | |||||||| ||
Sbjct 249744 GGTCTTACCAGTCAAAGTCTTGACAAA 249770
>seq852
Length=23035
Score = 141 bits (156), Expect = 2e-28
Identities = 152/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || | ||| || |||||||| ||||| || || || || || || || || |||||
Sbjct 375 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 316
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| ||||| || || | |||||| ||||| || ||||| |||||||||||
Sbjct 315 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 256
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||| ||| || || ||||| | ||||| || || | ||| || ||
Sbjct 255 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 196
Query 68429 TTTTCCCGTGAGGGTCTTGAC 68449
|| || || || ||||||||
Sbjct 195 CTTACCTGTCAGTGTCTTGAC 175
Score = 102 bits (112), Expect = 2e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314
|||||| || || || || ||||||||||| || || || | || || ||||||||||
Sbjct 172 CAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAG 113
Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374
||||| || || || || | ||| ||||| || || || || ||||| || ||||||||
Sbjct 112 TTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAAT 53
Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
||| |||||| || || ||||| | ||||| || || | ||| ||
Sbjct 52 CTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 2
>seq888
Length=220
Score = 125 bits (138), Expect = 1e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || | ||| |||||||| || ||||||||||| || || || || || ||
Sbjct 178 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 119
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | ||||| ||||| || || | ||||||||| || || ||||| |||||||||||
Sbjct 118 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 59
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
|||||| || |||||| || || ||||| | ||||| || || | ||| ||
Sbjct 58 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921611928065480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |