Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq852 190 5e-43 seq445 161 2e-34 seq693 145 2e-29 seq888 141 2e-28 seq398 138 3e-27 >seq852 Length=23035 Score = 190 bits (210), Expect = 5e-43 Identities = 158/193 (82%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| |||||||||||||||||||| |||||||||||||| || | || ||||| ||| Sbjct 377 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 318 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| || |||||||| || || || | || ||| |||||||||||||| ||||| ||| Sbjct 317 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 258 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| | Sbjct 257 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 198 Query 195106 GTCTTTCCTGTCA 195118 ||||| ||||||| Sbjct 197 GTCTTACCTGTCA 185 >seq445 Length=31504 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | ||||| || | |||||||| || ||||| |||||||| | || || Sbjct 214 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 273 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 274 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 333 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| | Sbjct 334 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 393 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || ||||| | ||||| Sbjct 394 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 435 Score = 123 bits (136), Expect = 6e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 ||||||||| || || ||||| || ||||| || | |||| ||||| || ||||| |||| Sbjct 4 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCT 62 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 ||||||| || ||||| | | ||||| |||||||| || ||||| ||||| || |||| Sbjct 63 GCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTT 122 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | ||| ||||| || || ||||| || ||| || || | || | || || || | Sbjct 123 TCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGG 182 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| || || || | ||||| Sbjct 183 TCAAAGTCTTAACAAAGATCTGCAT 207 >seq693 Length=293144 Score = 145 bits (160), Expect = 2e-29 Identities = 165/217 (76%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| | Sbjct 249555 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 249613 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTC-TGGAGGAATG 195036 |||| || ||||| | |||||||| || ||||| | || ||||||||| || || || Sbjct 249614 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCANGGTGGGATA 249673 Query 195037 CCTTCTTTGTCTTG--AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTT 195094 ||||| |||||||| ||| ||| |||||| || ||||| ||||| ||| ||| |||| Sbjct 249674 CCTTCCTTGTCTTGNNAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTT 249733 Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 | | || | ||||| || |||||||| || || || Sbjct 249734 CCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 249770 >seq888 Length=220 Score = 141 bits (156), Expect = 2e-28 Identities = 141/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | || |||||||| ||||| || ||||| | || || Sbjct 187 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 128 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | || |||||| ||||||||||| || Sbjct 127 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 68 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| |||||||| ||||| ||||| ||| ||| || || || Sbjct 67 TTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAG 8 Query 195099 GGT 195101 ||| Sbjct 7 GGT 5 >seq398 Length=66313 Score = 138 bits (152), Expect = 3e-27 Identities = 161/215 (75%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGA-G 194977 ||| | |||||| || | || | |||||| || ||||| || ||||| || | ||| | Sbjct 29181 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGANG 29122 Query 194978 TTCTCCCATCTTCGAGCTGCTT-ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036 |||| || ||||| | ||||| ||| || ||||| | || ||||||||| || || || Sbjct 29121 TTCTACCGTCTTCCAATTGCTTNACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATA 29062 Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096 ||||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| Sbjct 29061 CCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCC 29002 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 | || | ||||| || |||||||| || ||||| Sbjct 29001 AAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 28967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109468678353203