Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq852 190 5e-43
seq445 161 2e-34
seq693 145 2e-29
seq888 141 2e-28
seq398 138 3e-27
>seq852
Length=23035
Score = 190 bits (210), Expect = 5e-43
Identities = 158/193 (82%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| |||||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 377 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 318
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || |||||||| || || || | || ||| |||||||||||||| ||||| |||
Sbjct 317 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 258
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105
||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| |
Sbjct 257 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 198
Query 195106 GTCTTTCCTGTCA 195118
||||| |||||||
Sbjct 197 GTCTTACCTGTCA 185
>seq445
Length=31504
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 214 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 273
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || ||
Sbjct 274 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 333
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 334 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 393
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 394 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 435
Score = 123 bits (136), Expect = 6e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995
||||||||| || || ||||| || ||||| || | |||| ||||| || ||||| ||||
Sbjct 4 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCT 62
Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055
||||||| || ||||| | | ||||| |||||||| || ||||| ||||| || ||||
Sbjct 63 GCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTT 122
Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115
| ||| ||||| || || ||||| || ||| || || | || | || || || |
Sbjct 123 TCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGG 182
Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140
||||||| || || || | |||||
Sbjct 183 TCAAAGTCTTAACAAAGATCTGCAT 207
>seq693
Length=293144
Score = 145 bits (160), Expect = 2e-29
Identities = 165/217 (76%), Gaps = 5/217 (2%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977
||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| |
Sbjct 249555 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 249613
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTC-TGGAGGAATG 195036
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || ||
Sbjct 249614 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCANGGTGGGATA 249673
Query 195037 CCTTCTTTGTCTTG--AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTT 195094
||||| |||||||| ||| ||| |||||| || ||||| ||||| ||| ||| ||||
Sbjct 249674 CCTTCCTTGTCTTGNNAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTT 249733
Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| | || | ||||| || |||||||| || || ||
Sbjct 249734 CCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 249770
>seq888
Length=220
Score = 141 bits (156), Expect = 2e-28
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | || |||||||| ||||| || ||||| | || ||
Sbjct 187 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 128
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | || |||||| ||||||||||| ||
Sbjct 127 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 68
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| |||||||| ||||| ||||| ||| ||| || || ||
Sbjct 67 TTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAG 8
Query 195099 GGT 195101
|||
Sbjct 7 GGT 5
>seq398
Length=66313
Score = 138 bits (152), Expect = 3e-27
Identities = 161/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGA-G 194977
||| | |||||| || | || | |||||| || ||||| || ||||| || | ||| |
Sbjct 29181 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGANG 29122
Query 194978 TTCTCCCATCTTCGAGCTGCTT-ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036
|||| || ||||| | ||||| ||| || ||||| | || ||||||||| || || ||
Sbjct 29121 TTCTACCGTCTTCCAATTGCTTNACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATA 29062
Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096
||||| |||||||| || || |||||| || ||||||||||| ||| ||| |||||
Sbjct 29061 CCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCC 29002
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| || | ||||| || |||||||| || |||||
Sbjct 29001 AAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 28967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109468678353203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |