Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq445 107 1e-18 seq888 100 2e-16 seq693 87.8 1e-12 >seq445 Length=31504 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||||| | ||| | ||||| ||| ||| || ||||| ||||||||||| Sbjct 209 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 268 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| | |||| || | ||||||||||||||| |||| || |||||||| | || Sbjct 269 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 328 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||| || || || | | | || || | || || Sbjct 329 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 388 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || |||||||| || || ||||||||||| Sbjct 389 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 435 >seq888 Length=220 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||||||||| | ||| |||||| ||||| || |||||||| || ||| | |||| Sbjct 178 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 119 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| |||||||||||||| |||| || |||||||| | |||| || |||||||| Sbjct 118 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 59 >seq693 Length=293144 Score = 87.8 bits (96), Expect = 1e-12 Identities = 133/187 (71%), Gaps = 5/187 (3%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||| ||||| | ||| | |||| ||||| |||||||| ||||| Sbjct 249586 TCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAG 249645 Query 48636 ATCAGTCGCTGTTGATC--CGTGGGAACGCCCTCCTTGTC--GCTAATCTTTTGTTTTAC 48691 |||| || ||||| || ||||| | || |||||||| | ||||||| || || Sbjct 249646 ATCAATCTTTGTTGGTCANGGTGGG-ATACCTTCCTTGTCTTGNNAATCTTTGACTTGAC 249704 Query 48692 AGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTT 48751 | | | || || || | || || |||| || || || || || |||||||| || Sbjct 249705 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 249764 Query 48752 TACAAAA 48758 |||||| Sbjct 249765 GACAAAA 249771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380933379806607