Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq562 131 1e-25
seq693 100 2e-16
seq888 86.0 5e-12
>seq562
Length=104585
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || || || ||||| ||||| || |||||| ||| ||| ||
Sbjct 93500 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 93441
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || ||||| || ||| ||||| || || | || ||
Sbjct 93440 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 93381
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || || |||||||||||| || |||| || |||| ||
Sbjct 93380 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 93321
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||||||||| ||| |||| || ||||| |||| ||
Sbjct 93320 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 93271
>seq693
Length=293144
Score = 100 bits (110), Expect = 2e-16
Identities = 159/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
||||| || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 249770 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 249711
Query 28623 GCCGATCTCAAGCAAAAAATCGCC--GACAAAGAGGGAGTGCC-CGTAGATCAACAGAGA 28679
| | || ||||| ||| || | ||||| || || | || | || ||||| |||
Sbjct 249710 GACAATGTCAAGTCAAAGATTNNCAAGACAAGGAAGGTATCCCACCNTGACCAACAAAGA 249651
Query 28680 CTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAA 28739
| |||||||| || || ||||||||||| || ||| || | || || |||||||||
Sbjct 249650 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 249591
Query 28740 AAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
|||||||| ||| ||||| | || || ||||| |||| || || ||
Sbjct 249590 AAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 249544
>seq888
Length=220
Score = 86.0 bits (94), Expect = 5e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 28667 AGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 28726
||||||||| ||| | || ||||| || || ||| ||||||| || ||| || | ||
Sbjct 79 AGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGA 138
Query 28727 TTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||||||| ||||| ||||| |||| |||| || ||||| |||| || ||
Sbjct 139 TTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425400087179511
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |