Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq445 152 5e-32 seq562 150 2e-31 seq888 120 3e-22 seq852 111 1e-19 seq693 96.9 3e-15 seq398 93.3 4e-14 >seq445 Length=31504 Score = 152 bits (168), Expect = 5e-32 Identities = 160/208 (77%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || | ||||||||||| || || | || || ||| || || Sbjct 207 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 148 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 147 GACACGATCGATAACGTTAAGTCGAAA-ATCCAGGACAAGGAAGGTATCCCTCCAGATCA 89 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||||||| || ||||| || || |||| | |||| || || || Sbjct 88 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 29 Query 24883 CATTCAAAAGGAATCGACACTACACTTG 24910 ||| ||||||||||| || || |||||| Sbjct 28 CATCCAAAAGGAATCTACTCTTCACTTG 1 Score = 127 bits (140), Expect = 2e-24 Identities = 156/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||||||||| || || | ||||| ||| | || Sbjct 435 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 376 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | ||| || |||||||| ||||| || ||||| ||||| Sbjct 375 GATACCATCGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGATCA 317 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | |||||||||||||| || ||||| || || |||| |||| ||||| || Sbjct 316 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 257 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||| ||||| || || |||| |||| Sbjct 256 CATTCAGAAGGAGTCCACCTTACATCTTG 228 >seq562 Length=104585 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||||||||| |||||||| || ||||| ||| | | Sbjct 93498 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 93439 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 93438 TGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 93379 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| |||| || || || Sbjct 93378 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 93319 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || ||||||||||| ||| ||||| | || || || Sbjct 93318 CATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTGG 93268 >seq888 Length=220 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 24739 TATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAG 24797 ||| || || || || ||| | ||||||| | || |||| |||| ||| || |||| Sbjct 1 TATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAA-ATTCAAG 59 Query 24798 ACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGG 24857 |||| ||||| || ||||| ||||||||| | ||||| |||||||| || || ||||| | Sbjct 60 ACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAG 119 Query 24858 ATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGC 24917 | |||| |||| |||||||||||||| || || || || | || ||||||||| Sbjct 120 ACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGA 179 Query 24918 GATTGCGCGGAGG 24930 ||||| | || || Sbjct 180 GATTGAGAGGTGG 192 >seq852 Length=23035 Score = 111 bits (122), Expect = 1e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 24739 TATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGA 24798 ||| || || || || ||| | ||||||| | || | || ||| ||||| ||||| Sbjct 1 TATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAGATTCAAGA 60 Query 24799 CAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 |||||||| || ||||| |||||||| | ||||| ||||| || || || || || || Sbjct 61 TAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGA 120 Query 24859 TTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGT 24914 | |||| | |||| || || ||||| ||||||||||| || || |||||| ||| Sbjct 121 TGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTGNTGT 176 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || || ||||| ||||| || || || || ||| | | ||||| | || ||| Sbjct 178 AAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAAC 237 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||| | ||| || |||||||| ||||| || ||||| || || ||| | ||||| || Sbjct 238 GTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTT 296 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 |||||| || || || || ||| |||| |||| || || || ||||||||||| || Sbjct 297 TGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTC 356 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| | || ||| | ||| | || || Sbjct 357 CACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 389 >seq693 Length=293144 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | | ||||| | || | || || | Sbjct 249755 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCA 249696 Query 24788 AAGAT--CCAAGACAAAGAAGGAATACCTCCC-GATCAACAACGTTTGATCTTTGCCGGG 24844 ||||| |||||||| ||||| || || || || |||||| | ||||||||||| || Sbjct 249695 AAGATTNNCAAGACAAGGAAGGTATCCCACCNTGACCAACAAAGATTGATCTTTGCTGGT 249636 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 || || |||| || |||| | |||| || || ||||||||||| ||||| || | Sbjct 249635 AAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACTTTG 249576 Query 24905 CACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||| ||||| | || || Sbjct 249575 CACTTAGTCTTGAGATTGAGAGGTGG 249550 >seq398 Length=66313 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || | || ||||| || || || | ||||| ||| | | ||||| | || | Sbjct 28971 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGATA 29030 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||||||||| ||||| || || || || |||||| | ||||||| Sbjct 29031 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 29090 Query 24837 TTGCCGG-GAAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATAACATTCAAAAGGA 24894 |||| || || || |||| || |||| | || || || ||||| |||||||| Sbjct 29091 TTGCTGGTNAAGCAATTGGAAGACGGTAGAACNTCTATCTGACTACAACATCCAAAAGGA 29150 Query 24895 ATCGACACTACACTTGGTGTTGCGATT 24921 ||| || |||| ||||| ||| |||| Sbjct 29151 ATCCACTTTACATTTGGTCTTGAGATT 29177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892488038520