Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq888 118 2e-21
seq693 95.1 2e-14
seq445 87.8 3e-12
>seq888
Length=220
Score = 118 bits (130), Expect = 2e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 146090 CGATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCA 146149
||| |||||| | || || |||| |||||| ||| || ||||| ||||| || |||||
Sbjct 25 CGACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 84
Query 146150 ACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAA 146209
||||||| | |||||||| ||||| ||| | || || ||||||| | | ||||||||
Sbjct 85 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 144
Query 146210 TATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|| || ||||| || || | ||||| || || |||| ||||| ||||
Sbjct 145 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 194
>seq693
Length=293144
Score = 95.1 bits (104), Expect = 2e-14
Identities = 152/217 (70%), Gaps = 3/217 (1%)
Strand=Plus/Minus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || || || || || || || ||| | || || ||| | || |||||| | |||
Sbjct 249764 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 249705
Query 146106 GTAAAAAATAAAAT--ACAACTTAAAGAAGGCATTCCACCC-GATCAACAAAGACTCATT 146162
|| || || || ||| || ||||| || ||||| || ||||||||| | ||
Sbjct 249704 GTCAAGTCAAAGATTNNCAAGACAAGGAAGGTATCCCACCNTGACCAACAAAGATTGATC 249645
Query 146163 TTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAA 146222
||||| ||||| ||||| || || |||||| || | || || || || |||||||||
Sbjct 249644 TTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAA 249585
Query 146223 TCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|| ||| | || ||||| || |||| ||||| ||||
Sbjct 249584 TCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 249548
>seq445
Length=31504
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||| || || | || || ||| | ||
Sbjct 434 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 375
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | || || || ||||| ||| || ||||| || || || |||||||
Sbjct 374 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 315
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || |
Sbjct 314 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 255
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || || || | ||| | || || | ||||||| ||||
Sbjct 254 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786157467184280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |