Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq445 111 1e-19
seq562 100 2e-16
seq888 98.7 6e-16
seq852 84.2 1e-11
>seq445
Length=31504
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||| | ||| | ||| |||||| |||||||| ||||| ||
Sbjct 209 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 268
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| || || ||||||||||| || || | ||||| || || ||
Sbjct 269 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 328
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | |||||| | || || || || ||
Sbjct 329 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 387
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct 388 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 435
Score = 98.7 bits (108), Expect = 6e-16
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 34500 CAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAG 34559
||| || ||||| |||||||| ||||| || || || | |||| ||||||| ||
Sbjct 1 CAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAG 60
Query 34560 TTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGAT 34619
|| ||||||||||| || || | |||||| || || || | || |||||||| |||
Sbjct 61 CTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGAT 120
Query 34620 CTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTAC 34678
||| | |||||| || || ||||| | || || || | || || |||||||
Sbjct 121 -TTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 179
Query 34679 CGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || ||||| ||||||||
Sbjct 180 CGGTCAAAGTCTTAACAAAGATCTGCAT 207
>seq562
Length=104585
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || ||||| |||||||| ||||| || || ||
Sbjct 93271 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 93330
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 93331 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 93390
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||||| | || || | ||| ||||| || ||
Sbjct 93391 ATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 93449
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 93450 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 93501
>seq888
Length=220
Score = 98.7 bits (108), Expect = 6e-16
Identities = 115/154 (75%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | |||||||||||| | || ||| || |||||||||||||| ||
Sbjct 192 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 133
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| ||||||||||| || || | ||||| || || ||
Sbjct 132 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 73
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG 34633
| || ||||||||| ||| ||| |||| |||
Sbjct 72 ATACCTTCCTTGTCT-TGAATTTTACTTTTGACG 40
>seq852
Length=23035
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| |||||| |||||||||||| || || || || || |||| | ||||| |||||
Sbjct 365 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGC 306
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||||||||| || || | || ||||| || || | || ||||||||| ||| |||
Sbjct 305 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCT-TGAATTTT 247
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| |||||| | ||| ||||| || || || | |||||| || ||||| ||
Sbjct 246 CGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 187
Query 34683 TAACGTTTTCACA 34695
| || || |||
Sbjct 186 CAGTGTCTTGACA 174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726113287797
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |