Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02-
08] 909 sequences; 11,453,150 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq562 125 2e-23
seq852 113 1e-19
seq693 96.9 8e-15
>seq562
Length=104585
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| || |||
Sbjct 93494 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGAC 93435
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| || || || ||||| |||
Sbjct 93434 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAA 93375
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 93374 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 93315
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 93314 CAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 93276
>seq852
Length=23035
Score = 113 bits (124), Expect = 1e-19
Identities = 131/173 (76%), Gaps = 3/173 (2%)
Strand=Plus/Plus
Query 177957 ATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGAC 178016
|| ||||| ||||| ||| || ||||| || || ||||||||| |||||||| ||
Sbjct 2 ATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAGATTCAAGAT 61
Query 178017 AAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT 178076
|||||||| ||||||||||| || || || | || || || || || || || ||||||
Sbjct 62 AAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGAT 121
Query 178077 GGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| || || |||| | || || ||| ||||||| ||||| || || || ||||
Sbjct 122 GGTAGAAC-CTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCA-CTTG 172
>seq693
Length=293144
Score = 96.9 bits (106), Expect = 8e-15
Identities = 155/218 (71%), Gaps = 5/218 (2%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | || || ||| || ||||| ||
Sbjct 249771 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 249712
Query 177989 CGAGAACGTCAAACAAAAGATT--CAGGACAAAGAAGGAATCCCTCCG-GACCAGCAACG 178045
|| || ||||| ||||||| || ||||| ||||| ||||| || ||||| ||| |
Sbjct 249711 TGACAATGTCAAGTCAAAGATTNNCAAGACAAGGAAGGTATCCCACCNTGACCAACAAAG 249652
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCC 178104
| | ||||| || || || || | ||||| || || || |||| | || || ||| | |
Sbjct 249651 ATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACATTC 249593
Query 178105 AAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||| || |||| | || |||||| | |||
Sbjct 249592 AAAAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGA 249555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203717180669346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |