Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq508 123 2e-23 seq727 100 2e-16 >seq508 Length=76228 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || ||||| |||| ||| ||| ||||||||||| || || | Sbjct 27953 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 27894 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | |||| |||||||| || ||||| || ||||| | ||||| || ||||| Sbjct 27893 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27834 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAAC--CGCCGCCACGCTGTCCCCACCCTCCA 45287 | ||| |||||||| |||||| |||||| | || | |||| | || | Sbjct 27833 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCG-NATAGTGTCAGAAGATTCAA 27775 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | ||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 27774 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27726 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATAC-CAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||||||||||| || || |||||| || || ||||| || ||||||||||| Sbjct 27724 CCACCTCTCAATCTCAACACNCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 27665 Query 45169 CA--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || ||| | | |||| || || || || ||||| || ||||||| |||||| || ||| Sbjct 27664 CAAGGTT--CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 27607 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | ||| ||||||||| ||||| |||||| | | |||| || Sbjct 27606 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 27547 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| | || || || || || |||| |||||| |||||||| ||||| Sbjct 27546 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27497 >seq727 Length=102664 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||| || || ||||| || |||||||||||| | Sbjct 93990 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 94049 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | | || |||| ||| || || || || ||||| | |||||||| || | Sbjct 94050 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 94107 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| || || ||| || | | |||| | || | Sbjct 94108 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 94167 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 | |||| |||||| ||||| || || | |||||| || || |||||||| ||| || Sbjct 94168 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCT 94223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070279091462