Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02-
08] 1,022 sequences; 11,528,256 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq508 125 5e-24
seq138 111 1e-19
seq727 105 4e-18
seq139 100 2e-16
seq239 98.7 7e-16
seq549 86.0 4e-12
>seq508
Length=76228
Score = 125 bits (138), Expect = 5e-24
Identities = 168/233 (72%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | | | ||| | ||| | ||| |||||| ||||| ||||||||||
Sbjct 27497 TACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAG 27438
Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
||| |||| |||| |||| || || |||||||| || | | |||||||||
Sbjct 27437 ACA----GCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCT 27382
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264
| |||| ||||| ||||| |||||| ||| || || | || ||||| | |
Sbjct 27381 GGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT 27322
Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||||| ||||| || |||||||| ||||| || || ||||| ||||||||
Sbjct 27321 TCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27269
Score = 123 bits (136), Expect = 2e-23
Identities = 166/230 (72%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACAC-CAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
||||||||||||| | |||||| ||| |||||||| |||||||| || ||||| |||
Sbjct 27726 TACCACCTCTCAATCTCAACACNCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 27667
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
||||| | |||| |||| || || |||||||| || | | |||||||| |
Sbjct 27666 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 27607
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|||| ||||| |||||| ||||| ||| || || | || || || ||||
Sbjct 27606 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 27547
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||| || || |||||||| ||||| || || || || ||||||||
Sbjct 27546 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27497
Score = 107 bits (118), Expect = 1e-18
Identities = 165/234 (71%), Gaps = 9/234 (4%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | |||||||||||| | || ||| || ||||| || |||||||
Sbjct 27955 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 27896
Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
||| |||| |||| || | ||| || |||||||| || | | |||||||||
Sbjct 27895 ACA----GCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCT 27840
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCT-GGACAGTATCTCCACT 38263
| || | ||||| ||||| |||||| ||| || || | | | ||| || |
Sbjct 27839 GGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGNATAGTGTCAGAAGA 27780
Query 38264 TTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| |||| || ||||| ||||| |||| || || || || || |||||
Sbjct 27779 TTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27726
Score = 105 bits (116), Expect = 4e-18
Identities = 162/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACAC-CAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
||||||||||||| | |||||| ||| |||||||| |||||||| || ||||| |||
Sbjct 28184 TACCACCTCTCAATCTCAACACNCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 28125
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
||||| | | || |||| ||| || || ||||| || | | |||||||| |
Sbjct 28124 GACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGA 28065
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|||| |||||||| || |||||| || || || | | ||| || | ||||
Sbjct 28064 GGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 28005
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| |||| || ||||| || || || | ||||| ||||| || |||||
Sbjct 28004 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27955
Score = 100 bits (110), Expect = 2e-16
Identities = 168/240 (70%), Gaps = 10/240 (4%)
Strand=Plus/Minus
Query 38084 ATCA-TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142
|||| |||||||| ||||| | ||| || | ||||||||| |||||||||||||||||
Sbjct 28419 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 28360
Query 38143 AATCAGACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGT 38198
| || |||| |||| | || |||| ||| || |||||||| || | | |||
Sbjct 28359 AGTCCGACA----GCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGC 28304
Query 38199 TGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCT-GGACAGTATC 38257
|| || | || | ||||| ||||| |||||| ||| || || | | ||| ||
Sbjct 28303 TGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCANATAGTGTC 28244
Query 38258 TCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| |||||| |||| || ||||| ||||| |||| || || || || || |||||
Sbjct 28243 AGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 28184
>seq138
Length=102
Score = 111 bits (122), Expect = 1e-19
Identities = 72/79 (91%), Gaps = 5/79 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 79 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 20
Query 25957 TAATCCTTTCATGCGCGTC 25975
|||||| ||||||||||||
Sbjct 19 TAATCCATTCATGCGCGTC 1
>seq727
Length=102664
Score = 105 bits (116), Expect = 4e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | ||| ||||| || ||||| |||||||| || ||||| || ||
Sbjct 93989 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 94048
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|||| | | || || ||||| || || ||||| || | | |||||| || | ||
Sbjct 94049 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 94108
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| || || ||| ||||| | | ||| || | ||||||
Sbjct 94109 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 94168
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||| | |||||||| ||||| || || || || ||||| || ||||| ||
Sbjct 94169 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 94219
>seq139
Length=137
Score = 100 bits (110), Expect = 2e-16
Identities = 69/78 (88%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
||||||| |||||||||||||||| |||||| || | ||||||||||||||||||||||
Sbjct 86 TCTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCTCTGTACTTGTTCGCTATCGGTCTCT 27
Query 20006 CGGTAATATTTAGCCTTA 20023
|| |||||||||| |||
Sbjct 26 CGCCAATATTTAGCTTTA 9
>seq239
Length=103
Score = 98.7 bits (108), Expect = 7e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| || ||||||||||||||||||| |
Sbjct 14 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTGCTTGTTCGCTATCGGTCTCTC 73
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 74 GCCAATATTTAGCTTTA 90
>seq549
Length=103
Score = 86.0 bits (94), Expect = 4e-12
Identities = 59/67 (88%), Gaps = 5/67 (7%)
Strand=Plus/Minus
Query 25930 TAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAG 25984
|||||||||||||||| || |||||||||||||| |||||||||||| ||||||||
Sbjct 103 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCGCTAATTAG 44
Query 25985 ATGACGA 25991
|||||||
Sbjct 43 ATGACGA 37
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943028023282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |