Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq508 113 4e-20 >seq508 Length=76228 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||||| || ||||| || ||||| |||||||| || ||| | | || || Sbjct 27478 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 27419 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||| || || || ||||||||| || ||||| ||||| || || |||||||| Sbjct 27418 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 27359 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 |||||| ||| | ||||| ||| ||| || | | || ||||| | || | |||| Sbjct 27358 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 27300 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||| ||| || || ||||||||||| Sbjct 27299 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 27269 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| | Sbjct 27953 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 27894 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | | || || || || || || || | ||||||| || ||||| ||||| Sbjct 27893 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27834 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| |||||| ||| | ||||| | ||||| | | || || Sbjct 27833 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGNATAGTGTCAGAAGATTCAAC 27774 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || ||||| || || |||||||| ||||| Sbjct 27773 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27726 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||||||||| || || ||| | | ||| ||||| || || || Sbjct 28381 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 28322 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||||| ||||| || ||||| || || |||||||| |||||| ||| Sbjct 28321 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 28262 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| | ||||| | | || || || | ||| | || || || ||||| || Sbjct 28261 ACGTTGTCANATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGT 28202 Query 127096 TTTTACAAAAATCTGCAT 127113 || |||||||| ||||| Sbjct 28201 CTTGACAAAAATTTGCAT 28184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475494725477280