Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq508 111 2e-19 >seq508 Length=76228 Score = 111 bits (122), Expect = 2e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACAC-CAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 || ||||| || | |||||| || || | ||| ||||||||||| |||||||| || Sbjct 27724 CCACCTCTCAATCTCAACACNCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 27665 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 | || | |||| || |||||||| ||||| || ||||| | ||| || || | || Sbjct 27664 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 27605 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| ||| ||| ||| | | | | ||||||| ||||| || Sbjct 27604 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 27545 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||||||||| || |||| || ||||||||||| ||||| Sbjct 27544 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231179079440