Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02-
08] 1,022 sequences; 11,528,256 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq508 192 1e-43
seq314 98.7 2e-15
seq295 98.7 2e-15
>seq508
Length=76228
Score = 192 bits (212), Expect = 1e-43
Identities = 173/216 (80%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| |||||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 28399 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 28340
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || |||||||| || || || | || ||| |||||||||||||| ||||| |||
Sbjct 28339 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 28280
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCA-ATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
||||||||||| ||| ||||| ||| || ||||| ||| ||| || || ||||| |
Sbjct 28279 TCTTGAATTTTCGACTTAACGTTGTCANATAGTGTCAGAAGATTCAACCTCTAGGGTTAT 28220
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||||| || || || || | ||||||
Sbjct 28219 AGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 28184
Score = 165 bits (182), Expect = 2e-35
Identities = 173/224 (77%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACA-AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGA 194976
||| | |||||| || | ||||||||| || || ||||| || ||||| || | ||||
Sbjct 28177 TCTCAATCTCAACACNCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG- 28119
Query 194977 GTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036
||||| |||||||| || |||||||| || || || | || ||||| || ||||| ||
Sbjct 28118 GTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATA 28059
Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096
|||||||| ||||||||||| |||||||| ||||| ||||| ||| ||| || ||
Sbjct 28058 CCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCT 27999
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| ||||| | |||||| ||||| | ||||||
Sbjct 27998 AGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27955
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 27490 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 27431
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || ||
Sbjct 27430 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 27371
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 27370 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 27311
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 27310 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27269
Score = 152 bits (168), Expect = 1e-31
Identities = 168/223 (75%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | || |||||||| ||||| || ||||| | || ||
Sbjct 27948 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 27889
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || |||||||| || || || | || |||||| ||||||||||| ||
Sbjct 27888 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 27829
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTC-AATGGTGTCCGAACTTTCCACTTCAA 195097
||| |||||||||||||| ||| ||||| || || ||||| ||| ||| || || |
Sbjct 27828 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGNATAGTGTCAGAAGATTCAACCTCTA 27769
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| | ||||| ||||||| || || || || | ||||||
Sbjct 27768 GGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 27726
Score = 129 bits (142), Expect = 1e-24
Identities = 165/224 (74%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACA-AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGA 194976
||| | |||||| || | ||||||||| || || ||||| || ||||| || | ||||
Sbjct 27719 TCTCAATCTCAACACNCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG- 27661
Query 194977 GTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036
||||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| ||
Sbjct 27660 GTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATA 27601
Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096
||||| ||||| || ||||| ||| ||||| || || ||||| || ||| || ||
Sbjct 27600 CCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCT 27541
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || | || || || |||||||| || || || | |||||
Sbjct 27540 AAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27497
>seq314
Length=101758
Score = 98.7 bits (108), Expect = 2e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059
||| || ||||| | || ||||||||| || || || ||||| |||||||| || ||
Sbjct 39767 ACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGA 39708
Query 195060 CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
|||||| || ||||||||||| ||| ||| ||||| | || | ||||| || |||||
Sbjct 39707 CTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAA 39648
Query 195120 AGTTTTTACGAA 195131
||| || |||||
Sbjct 39647 AGTCTTAACGAA 39636
>seq295
Length=179504
Score = 98.7 bits (108), Expect = 2e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059
||| || ||||| | || ||||||||| || || || ||||| ||||||||||| |||
Sbjct 44316 ACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGA 44257
Query 195060 CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
|||||| || ||||| ||||| ||| ||| ||||| | || | ||||| || |||||
Sbjct 44256 CTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAA 44197
Query 195120 AGTTTTTACGAA 195131
||| || || ||
Sbjct 44196 AGTCTTGACAAA 44185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109467072031874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |