Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq508 149 2e-30 seq727 125 2e-23 >seq508 Length=76228 Score = 149 bits (164), Expect = 2e-30 Identities = 169/222 (76%), Gaps = 5/222 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || ||| Sbjct 27958 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 28017 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||||||| || ||||| || |||||||| ||||||||||| || || Sbjct 28018 ACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAG 28077 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || || || |||||||| || || |||| | || || ||| | Sbjct 28078 AGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 28136 Query 178103 CCAAAAAGAATCAACACTGCATCTT--GTTTTGAGACTCAGA 178142 |||||| ||||| || || || ||| || |||||| | ||| Sbjct 28137 CCAAAAGGAATCTACTCTTCA-CTTGNGTGTTGAGATTGAGA 28177 >seq727 Length=102664 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || || ||||| || || ||| || ||| Sbjct 94213 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGAC 94154 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || ||||| ||||| || || || ||||| ||| Sbjct 94153 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAA 94094 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | |||||||| || ||| | |||| || ||| || Sbjct 94093 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 94034 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || || || | || |||||| | ||| Sbjct 94033 CAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 93995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715437892268