Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099345.1_202017-02- 08] 1,124 sequences; 11,543,514 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq586 100 3e-16 seq71 87.8 2e-12 seq574 86.0 6e-12 >seq586 Length=31673 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||||| | | |||||||| ||||||||||| || || || | ||| || || || Sbjct 31442 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 31383 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| ||| Sbjct 31382 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT-TGAATTT 31324 Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 | | |||| |||| | | ||| |||| || || || || | || | |||||||| Sbjct 31323 TCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 31265 Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| || || ||||||||||| Sbjct 31264 GTCAAAGTCTTGACGAAAATCTGCAT 31239 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| ||||||||||| || || | ||| || || || ||||||| | Sbjct 31660 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCA 31601 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | |||||| || ||||| |||||||| ||||| |||||| || | Sbjct 31600 AAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACG 31541 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| || || ||||| | || | |||||||| |||| ||| || Sbjct 31540 TTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTA 31481 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 31480 ACAAAGATCTGCAT 31467 >seq71 Length=418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| ||||||||||| || || | || || ||||| ||||| | | Sbjct 405 GATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCA 346 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | | |||||| |||||||| ||||||||||| || ||| | || |||| | Sbjct 345 AAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC-TTGAATCTTACTTTTGAC 287 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| || || ||||| | || | || || || || ||||||| Sbjct 286 GTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTT 228 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||| ||||| Sbjct 227 TGACGAAAATTTGCAT 212 >seq574 Length=295212 Score = 86.0 bits (94), Expect = 6e-12 Identities = 310/482 (64%), Gaps = 10/482 (2%) Strand=Plus/Minus Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 ||||| ||| |||| |||| || || ||||| | || | ||||| ||||| ||| Sbjct 86672 GGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 86613 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | |||||| || | || || || |||||| | | || | | ||||||| Sbjct 86612 ATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCC 86553 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 |||| | | ||| | ||||||||||| ||| | ||||| | || | || ||| Sbjct 86552 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTAGAAGCTGGA 86493 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 || |||| ||| || | || || |||||||| ||| ||| || || || Sbjct 86492 GAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGA 86433 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386 | ||| ||| || |||||| ||||||||| || ||| ||| |||| || Sbjct 86432 GTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTACTTCCGATTCA 86373 Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446 | || | |||| || || | | | ||||||| |||||||| ||| | | || ||| Sbjct 86372 AAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGT 86313 Query 153447 CGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGA 153501 | ||||||| | ||| | | |||||| | | ||||||| ||| || |||| Sbjct 86312 CTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTCGA 86258 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 ||| | |||| | |||| | | ||||||| ||| | | | | ||||||||| || Sbjct 86257 TAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATTAT 86198 Query 153562 AG 153563 || Sbjct 86197 AG 86196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255427513280