Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099345.1_202017-02- 08] 1,124 sequences; 11,543,514 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq586 120 2e-22 seq439 109 4e-19 seq71 102 6e-17 >seq586 Length=31673 Score = 120 bits (132), Expect = 2e-22 Identities = 155/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 44131 CAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCA 44189 || |||||| || ||||||||||||||||| || | | || | | |||| || | Sbjct 31673 CAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTAC-CGTCTTCTA 31615 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||| |||||||||||||| | ||| ||||||| ||| | ||||||||| ||| | Sbjct 31614 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 31555 Query 44250 TCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 | ||| ||| || ||| | || ||||||| |||||| ||||| | || || || || Sbjct 31554 TTTTCGACTT-AACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTA 31496 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||| ||||| Sbjct 31495 CCGGTCAAAGTCTTAACAAAGATCTGCAT 31467 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | ||| || || | ||| |||||| || ||||||||||| Sbjct 31469 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 31410 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | |||| || |||||||| |||||||||||||| | || ||||||| Sbjct 31409 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 31350 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |||| Sbjct 31349 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 31291 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | || |||| || || || || || || | ||||| ||||| || ||||| || Sbjct 31290 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 31236 >seq439 Length=185073 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| || || ||||||||||||||||| |||| Sbjct 176399 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 176458 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || || | | Sbjct 176459 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 176516 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 176517 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 176574 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 176575 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 176625 >seq71 Length=418 Score = 102 bits (112), Expect = 6e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| || Sbjct 217 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 158 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | |||| ||||| ||||| |||||||| ||||| | || ||||| Sbjct 157 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATC 98 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 || ||| | ||||||||| || || ||| ||| || ||| | || ||||| | | Sbjct 97 TGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATAGTGTCAGAAG 39 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTC 44320 |||| ||||| | || || ||||| || || || ||| Sbjct 38 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 1 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 44131 CAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCGCTCGTCGTCCA 44189 || |||||| || ||||||||||||||||| || | | || | | | || || | Sbjct 418 CAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGT-TCTACCATCTTCTA 360 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 | ||||| || ||||| ||||| | ||| ||||| | ||| | |||||| || || | Sbjct 359 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 300 Query 44250 TCTT-CTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||| || || | ||| | || ||||||| ||||| ||||| | || || ||||| Sbjct 299 TCTTACT--TTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 242 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || ||||| |||||||| Sbjct 241 CCCTGTTAGAGTTTTGACGAAAATTTGCAT 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985468581508