Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099355.1_202017-02- 08] 1,556 sequences; 11,567,798 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1555 102 1e-17 >seq1555 Length=90247 Score = 102 bits (112), Expect = 1e-17 Identities = 188/272 (69%), Gaps = 5/272 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGG-AATCACCAAGCCAGCTA 16490 || |||||||| | | ||| ||| |||||||||||||||| | | || |||||||||| Sbjct 51671 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTNACTAAGCCAGCTA 51613 Query 16491 TCCGTCGTCTGGCTCGTC--GTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 || | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| Sbjct 51612 TCAGAAGATTAGCTAGNNAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGA 51553 Query 16549 GATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC 16608 | | | ||| ||||| |||| | | |||| ||| || || | || || Sbjct 51552 AGTCAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACAC 51493 Query 16609 CGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCA 16668 ||| ||||| || | |||||||| || || ||||| | || ||||| ||||| | || Sbjct 51492 CGAACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACA 51433 Query 16669 AGGCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 ||| | | | || ||||| || |||||| Sbjct 51432 AGGTAGAACCTTATACGGTTTCGGTGGTTAAT 51401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073777338308