Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099355.1_202017-02- 08] 1,556 sequences; 11,567,798 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq918 140 2e-28 seq1458 125 5e-24 seq1024 105 4e-18 seq842 105 4e-18 seq1490 98.7 7e-16 seq1358 98.7 7e-16 seq1313 98.7 7e-16 seq1497 95.1 8e-15 seq1198 87.8 1e-12 seq867 87.8 1e-12 >seq918 Length=103 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 4 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGGGGGAATCTCGT 63 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 64 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 98 >seq1458 Length=82318 Score = 125 bits (138), Expect = 5e-24 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | | ||| | ||| | ||| |||||| ||||| |||||||||| Sbjct 31488 TACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAG 31429 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| |||| |||| || || |||||||| || | | ||||||||| Sbjct 31428 ACA----GCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCT 31373 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| ||||| ||||| |||||| ||| || || | || ||||| | | Sbjct 31372 GGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT 31313 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| ||||| || |||||||| ||||| || || ||||| |||||||| Sbjct 31312 TCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31260 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/217 (71%), Gaps = 9/217 (4%) Strand=Plus/Minus Query 38084 ATCA-TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142 |||| |||||||| ||||| | ||| || | ||||||||| ||||||||||||||||| Sbjct 32329 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 32270 Query 38143 AATCAGACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGT 38198 | || |||| |||| | || |||| ||| || |||||||| || | | ||| Sbjct 32269 AGTCCGACA----GCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGC 32214 Query 38199 TGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCT 38258 || || | || | ||||| ||||| |||||| ||| || || | | ||| || Sbjct 32213 TGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCA 32154 Query 38259 CCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCA 38295 | |||||| |||| || ||||| ||||| |||| Sbjct 32153 GAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCA 32117 >seq1024 Length=103 Score = 105 bits (116), Expect = 4e-18 Identities = 70/78 (90%), Gaps = 5/78 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct 78 AAGCCCGTTCCCTTGGCTGTGGTTTCTCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 19 Query 25957 TAATCCTTTCATGCGCGT 25974 |||||| ||||||||||| Sbjct 18 TAATCCATTCATGCGCGT 1 >seq842 Length=185056 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | ||| ||||| || ||||| |||||||| || ||||| || || Sbjct 176381 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 176440 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| | | || || ||||| || || ||||| || | | |||||| || | || Sbjct 176441 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 176500 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| ||||| || || ||| ||||| | | ||| || | |||||| Sbjct 176501 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 176560 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||| | |||||||| ||||| || || || || ||||| || ||||| || Sbjct 176561 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 176611 >seq1490 Length=103 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| || ||||||||||||||||||| | Sbjct 14 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTTCTTGTTCGCTATCGGTCTCTC 73 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 74 GCCAATATTTAGCTTTA 90 >seq1358 Length=103 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||| || |||| |||||||||||||||||||||| | Sbjct 79 CTCTCTTTTCAAAGTTCTTTTCATCTTCCCATCACTGTACTTGTTCGCTATCGGTCTCTC 20 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 19 GCCAATATTTAGCTTTA 3 >seq1313 Length=103 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| || | |||||||||||||||||||||| | Sbjct 85 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCCCTGTACTTGTTCGCTATCGGTCTCTC 26 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 25 GCCAATATTTAGCTTTA 9 >seq1497 Length=103 Score = 95.1 bits (104), Expect = 8e-15 Identities = 64/72 (89%), Gaps = 5/72 (7%) Strand=Plus/Minus Query 25925 TTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTA 25979 ||||||||||||||||||||| || |||||||||||||| ||||||| |||||||| Sbjct 103 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCTCGTCACTA 44 Query 25980 ATTAGATGACGA 25991 |||||||||||| Sbjct 43 ATTAGATGACGA 32 >seq1198 Length=103 Score = 87.8 bits (96), Expect = 1e-12 Identities = 59/66 (89%), Gaps = 5/66 (8%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||| Sbjct 36 AAGCCCGTTCCCTTGGATGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 95 Query 25957 TAATCC 25962 |||||| Sbjct 96 TAATCC 101 >seq867 Length=103 Score = 87.8 bits (96), Expect = 1e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 19956 CAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATT 20015 |||||||||||||| |||||| |||| |||||||||||||||||||||| | |||||| Sbjct 1 CAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTCTCCAATATT 60 Query 20016 TAGCCTTA 20023 |||| ||| Sbjct 61 TAGCTTTA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940848145036