Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099355.1_202017-02- 08] 1,556 sequences; 11,567,798 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq842 131 1e-25 seq1458 100 2e-16 >seq842 Length=185056 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || || ||||| || ||||| |||||||| ||| Sbjct 176382 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 176441 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| ||||| || ||||| | ||||| | |||||||| |||| Sbjct 176442 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 176501 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || ||| || ||| | || ||||| || | ||| || Sbjct 176502 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 176561 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | |||||| || ||||| || | ||| || || ||||||||||| || Sbjct 176562 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 176611 >seq1458 Length=82318 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | |||| || | ||| | ||| || || || || ||||||||||| Sbjct 31486 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 31427 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| ||||||||| || || || || | ||||| | ||||| || || Sbjct 31426 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31367 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| |||||| || || | || || |||||| | ||| || Sbjct 31366 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31307 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||||||||| |||| ||| || || ||||| |||||| Sbjct 31306 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 31259 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 14971 AAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTTCTA 15028 || ||||| ||||| || ||||| |||||||| || || || |||| ||||||||| Sbjct 31693 AAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--GACAAGGTTCTACCGTCTTCTA 31636 Query 15029 ATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAA 15088 || || || || | ||||| | |||||| || || || ||||||||||| | Sbjct 31635 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 31576 Query 15089 TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTAC 15148 |||| || || | || || || ||| ||| || ||||| || |||||||||| Sbjct 31575 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 31516 Query 15149 CTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | |||| ||| || ||||| || |||||| Sbjct 31515 CGGTCAAAGTCTTAACAAAGATCTGCATA 31487 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||| || || || | ||||| || || || ||||| || ||||| || Sbjct 32321 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 32262 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||||| ||| || || || | ||||| | || ||||| ||| Sbjct 32261 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 32202 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| |||||| || || | || ||||| || | ||| || Sbjct 32201 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 32142 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 |||| ||| || || ||||||||||| || || ||| Sbjct 32141 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACA 32106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385222507460