Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099355.1_202017-02- 08] 1,556 sequences; 11,567,798 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq842 123 2e-23 seq1458 89.7 5e-13 seq1071 82.4 7e-11 >seq842 Length=185056 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 176394 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 176453 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 176454 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 176513 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||| ||||| || ||||| || |||| Sbjct 176514 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 176573 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 176574 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 176609 >seq1458 Length=82318 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 |||||| || || || || || || |||||||| ||||| || || | ||| || Sbjct 32310 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 32251 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| || Sbjct 32250 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 32191 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 ||||||| |||| | | | || | || | ||||| ||||| || || || || || | Sbjct 32190 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 32132 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACA 45329 || || || || || || || ||| Sbjct 32131 TAGTCTTACCTGTCAGTGTCTTGACA 32106 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 ||||| | ||| ||||| | || || ||||| || || || ||||| | ||| || Sbjct 31477 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 31418 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 || || | || || || || | ||||||| ||| || || || || || ||||| Sbjct 31417 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 31358 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || ||||||| |||| | | | || | || | ||| |||||||| || ||||| | || Sbjct 31357 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 31299 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| | ||| || || ||||| ||||| Sbjct 31298 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31260 >seq1071 Length=64164 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 |||| |||||||| | ||||| || ||| ||||| || |||| | | | Sbjct 9216 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 9275 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 || ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | || Sbjct 9276 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 9335 Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020 ||||| || ||||| || | |||||||||| ||||| ||| || ||||| | Sbjct 9336 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 9395 Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080 || || |||||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 9396 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 9455 Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140 || || ||| ||| || || || || || ||| || || || ||||||||| Sbjct 9456 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 9515 Query 123141 AAA 123143 ||| Sbjct 9516 AAA 9518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451994408537760