Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099355.1_202017-02-
08] 1,556 sequences; 11,567,798 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq854 203 3e-47
>seq854
Length=49595
Score = 203 bits (224), Expect = 3e-47
Identities = 563/855 (66%), Gaps = 24/855 (3%)
Strand=Plus/Plus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| ||
Sbjct 23402 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 23461
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || |||||||| ||||| || || || | ||||| | ||| ||
Sbjct 23462 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 23521
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| | ||| || | || || ||| || || || || | || ||| |||| | ||
Sbjct 23522 TTACCGAA-AGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 23580
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || |||| |||| ||| || | | ||||| ||
Sbjct 23581 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 23637
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 23638 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 23697
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| ||||| || || ||||| || ||||||||||||||||| | |||| ||||||
Sbjct 23698 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 23757
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| ||
Sbjct 23758 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 23817
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || || || | ||||| | || |||||| || |||| || || ||| ||
Sbjct 23818 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 23877
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| |||| ||||| | || |||| | || || ||
Sbjct 23878 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGAT 23934
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| || | ||||| | || ||||| ||
Sbjct 23935 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAAGTATC 23991
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | | | || ||||||| || |||||||| || || || || ||||| ||
Sbjct 23992 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 24051
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| | ||| |||||| | | || |||| || |||||||| || ||
Sbjct 24052 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 24111
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| || || || | ||||
Sbjct 24112 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTC 24171
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||||| | | ||| |||| ||||||| ||||||| | |||||
Sbjct 24172 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 24231
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 24232 GAAAGAAGCTTCGGC 24246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427041501538148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |