Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099375.1_202017-02- 08] 604 sequences; 11,417,167 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq439 150 2e-31 >seq439 Length=26259 Score = 150 bits (166), Expect = 2e-31 Identities = 546/843 (65%), Gaps = 21/843 (2%) Strand=Plus/Plus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || |||||||| ||| Sbjct 163 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 222 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTAT 13468 || ||| || || |||||||| |||||||| || ||| | ||| | || | ||| | Sbjct 223 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAATA-TTTCT 280 Query 13469 CACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAAT 13528 ||| | | | || | ||| || || | ||||||| ||||| |||||| | Sbjct 281 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 340 Query 13529 CACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCT 13584 || |||||||||| | || || | | || || | ||||| ||| Sbjct 341 CAGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCA 396 Query 13585 ATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGA 13644 || |||||||||| | | ||| | | || ||| | || | || | | Sbjct 397 ATTTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAA 456 Query 13645 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13704 || || | || || ||||| || || | || || ||||||| || | |||| Sbjct 457 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 516 Query 13705 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764 || ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || Sbjct 517 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 576 Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 || ||||| || || | || |||| | ||||| || | ||||| ||| |||||| | Sbjct 577 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 636 Query 13825 GCTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT 13883 || | || |||| |||||| || ||||||||| | || | || || Sbjct 637 GCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGAT 695 Query 13884 TGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCA 13941 || | || |||||||| || ||| | ||||||| | ||||| |||| ||||| Sbjct 696 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAAGTATCG 753 Query 13942 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAA 14001 || | ||| || |||||||||| || ||||| || || || ||||| || ||| Sbjct 754 ATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAA 813 Query 14002 CATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACA 14061 | | || |||| ||| || || | | | || |||| ||||||||||||||||| Sbjct 814 CTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACA 873 Query 14062 ATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14121 ||||| ||| ||| || ||||| || | | | ||| || || ||| | | | Sbjct 874 ATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCG 933 Query 14122 TTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14178 || | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| Sbjct 934 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 993 Query 14179 AAA 14181 ||| Sbjct 994 AAA 996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585186654560