Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099375.1_202017-02-
08] 604 sequences; 11,417,167 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq447 118 8e-22
seq326 109 4e-19
seq37 91.5 1e-13
>seq447
Length=31376
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | |||| || | ||| | |||||| || || || |||||||||||
Sbjct 31178 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 31119
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||||| || || || || | ||||| | |||||| || ||
Sbjct 31118 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31059
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || ||||||||| | ||| ||
Sbjct 31058 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 30999
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 30998 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 30951
>seq326
Length=184783
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 5/230 (2%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || || || || || ||||| |||||||| |||
Sbjct 8656 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8597
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 8596 AAAGTTCTACCAN-----AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8542
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || ||| ||| ||| | || || || || | ||| ||
Sbjct 8541 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8482
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 8481 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8432
>seq37
Length=350
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 15167 GTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15226
|| || || ||||| |||||||| || | |||| | ||||||| ||| || |||
Sbjct 350 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 291
Query 15227 GCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTT 15286
|| | ||||| | ||||| || || || |||||||| || ||| || || ||
Sbjct 290 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTG 231
Query 15287 ACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTT 15346
|| | || || || ||| | ||| || |||| ||| || || || ||||| ||||||
Sbjct 230 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 171
Query 15347 TTTACAAAAATTTGCATA 15364
|| || ||||||||||||
Sbjct 170 TTGACGAAAATTTGCATA 153
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || ||||| | || || ||||| || ||||| |||||
Sbjct 152 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 93
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | ||| || || || | ||||| | |||||| || |||
Sbjct 92 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 33
Query 15257 ATTCCTTCTTTGTCACAAATTTT 15279
|| ||||| ||||| ||||||
Sbjct 32 ATACCTTCCTTGTCTTGAATTTT 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362176533908364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |