Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099375.1_202017-02- 08] 604 sequences; 11,417,167 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq447 172 1e-37 seq326 147 4e-30 seq37 145 1e-29 seq149 114 3e-20 seq334 93.3 8e-14 seq251 84.2 4e-11 >seq447 Length=31376 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673 || || || ||||| || || |||||||| || |||||||||||||||| || || || Sbjct 31148 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 31089 Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 |||||||| | |||||||||||||||||| || |||||||| |||||||| || | || Sbjct 31088 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 31029 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || || || || ||||| || ||| |||||||| ||||| || || || ||||| ||| Sbjct 31028 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 30969 Query 82794 TTTACAAATATCTGCATTAT 82813 || || || |||||||| || Sbjct 30968 TTGACGAAAATCTGCATAAT 30949 Score = 140 bits (154), Expect = 6e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673 |||||||| || || || || || ||||| | |||||||||||||||| || || || Sbjct 31376 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 31317 Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 |||||||| | || |||||||||||||| || |||||||| || || || || | || Sbjct 31316 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 31257 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || || || ||||| || | ||| || || ||||| || || || || ||||| ||| Sbjct 31256 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 31197 Query 82794 TTTACAAATATCTGCAT 82810 || ||||| |||||||| Sbjct 31196 TTAACAAAGATCTGCAT 31180 >seq326 Length=184783 Score = 147 bits (162), Expect = 4e-30 Identities = 169/228 (74%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||| ||||||||||| || || || || || || || Sbjct 8657 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8598 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | ||||||| | ||| || ||||||||||| | ||||||||| || || || Sbjct 8597 CAAAGTTCTACCAN-----AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8543 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| || Sbjct 8542 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8483 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || || || ||||| || || || ||||| Sbjct 8482 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8435 >seq37 Length=350 Score = 145 bits (160), Expect = 1e-29 Identities = 119/145 (82%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || || || |||| ||||| |||||||| || |||||||||| Sbjct 154 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 95 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || ||||||||||||| ||||| || || ||||| || | ||||||||||||||||| Sbjct 94 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 35 Query 82702 GTATTCCTTCCTTATCTTGAATCTT 82726 | || |||||||| |||||||| || Sbjct 34 GAATACCTTCCTTGTCTTGAATTTT 10 Score = 140 bits (154), Expect = 6e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673 |||||||| || || || || || ||||| | ||||||| ||||||||||| || ||| Sbjct 350 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 291 Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 ||||| || | ||| |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct 290 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTG 231 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || || ||||| || || || ||| || || | ||||| ||||| ||||| | || Sbjct 230 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 171 Query 82794 TTTACAAATATCTGCAT 82810 || || || || ||||| Sbjct 170 TTGACGAAAATTTGCAT 154 >seq149 Length=22742 Score = 114 bits (126), Expect = 3e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635 |||| |||| || ||||| | || || | ||| ||||| || || || || ||||| | Sbjct 160 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 101 Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695 | || || || ||||||| ||||||||||| || || ||||| || | |||||| || | Sbjct 100 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 41 Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 ||||||| || |||||||| |||||||| || Sbjct 40 CTGGAGGAATACCTTCCTTGTCTTGAATTTT 10 >seq334 Length=200226 Score = 93.3 bits (102), Expect = 8e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || |||||||||| ||| |||||||| || || || || |||| Sbjct 156203 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 156262 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCT 82687 | | ||||||||||||| | ||| || ||||||||||| | ||| Sbjct 156263 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCT 156308 >seq251 Length=76955 Score = 84.2 bits (92), Expect = 4e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || || || || | ||| ||||| || || || || || |||| Sbjct 37049 TACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 37108 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCT 82687 ||||| ||||||||||||| | ||| || ||||||||||| | ||| Sbjct 37109 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCT 37154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981819601884756