Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099375.1_202017-02- 08] 604 sequences; 11,417,167 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq447 156 9e-33 seq326 145 2e-29 seq37 129 1e-24 seq149 89.7 1e-12 seq410 86.0 1e-11 >seq447 Length=31376 Score = 156 bits (172), Expect = 9e-33 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | || || ||||| || || ||||||| Sbjct 31371 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 31313 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||||| || || ||||| |||||||| ||||| || | || ||| Sbjct 31312 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 31253 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||||||| ||||| || | ||| || || | |||||| || ||||| ||||||||||||| Sbjct 31252 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 31193 Query 283087 CGAATATCTGCAT 283099 | || |||||||| Sbjct 31192 CAAAGATCTGCAT 31180 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || || |||||||| ||| || || || |||||||| |||| Sbjct 31179 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 31120 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| | || || ||||| || || |||||||||||||| | |||||| || || Sbjct 31119 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 31060 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| || Sbjct 31059 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 31000 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || || ||||| ||||||||||| ||||| |||||||| Sbjct 30999 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 30952 >seq326 Length=184783 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||| | ||| || || ||||| Sbjct 8621 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCAN-----AATTGCTTACCAGCAAA 8567 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 8566 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8507 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| || || || |||||||| || |||||||| || Sbjct 8506 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8447 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 8446 GAAAATTTGCATCTT 8432 >seq37 Length=350 Score = 129 bits (142), Expect = 1e-24 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | ||||| |||||||| || || |||| Sbjct 345 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAA 287 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||| || || ||||| || || ||||| ||||| ||| ||| Sbjct 286 AAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGT 227 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||| || || || || || ||||| || || | ||| || | Sbjct 226 TGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGA 167 Query 283087 CGAATATCTGCAT 283099 |||| || ||||| Sbjct 166 CGAAAATTTGCAT 154 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| ||||| ||||| || ||||| || |||| ||||| | || || || Sbjct 134 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 75 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 ||||| || |||||||| ||||| | |||||| || |||||||| ||||||||||| Sbjct 74 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 15 Query 283011 ATCTT 283015 || || Sbjct 14 ATTTT 10 >seq149 Length=22742 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 116 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 57 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||||| | ||| ||||| |||||||| ||||||||||| || || Sbjct 56 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 10 >seq410 Length=188 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||| ||||||||||| || || | || ||| | || |||||||| |||| ||| Sbjct 7 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 66 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || |||||||| |||| ||||| || || || ||||| Sbjct 67 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046731099547016