Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1810 107 1e-18 seq2510 84.2 2e-11 seq1665 82.4 6e-11 >seq1810 Length=65724 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| ||||||| Sbjct 57057 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 57116 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| | ||||||||| || || | |||||||| || Sbjct 57117 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 57176 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | ||| || | || Sbjct 57177 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 57236 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||||| || || || || ||||||||||| || Sbjct 57237 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 57268 >seq2510 Length=54301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 |||||| || || || |||||||| |||||||| | || ||| ||| |||||| | ||| Sbjct 22637 GTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTG 22696 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 || || ||| | || | |||||| || || || | |||||||| || ||||| Sbjct 22697 CTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 22756 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | || || | ||| || | || || || Sbjct 22757 CGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 22816 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 || ||| || |||||||||||||| Sbjct 22817 CAGTGTCTTGACAAAAATTTGCAT 22840 >seq1665 Length=400266 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||||||||||||||||||||| | || ||| ||| ||||||||||| || || Sbjct 356138 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 356197 Query 18189 GCATAGATAAGTCTTTGTTGATC 18211 ||| |||| | ||||||||| || Sbjct 356198 GCAAAGATCAATCTTTGTTGGTC 356220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379330342904730