Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1779 132 5e-26 >seq1779 Length=49459 Score = 132 bits (146), Expect = 5e-26 Identities = 337/508 (66%), Gaps = 11/508 (2%) Strand=Plus/Plus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 || || ||||||| || | |||||| ||||| ||||| || ||||||| |||| ||| Sbjct 23621 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 23680 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 || ||||| || || | ||||| || ||||| || || | || |||| || ||||| Sbjct 23681 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGCGGCAAAG 23740 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14072 || | || || ||| |||||| | || | || |||||| || |||||| || Sbjct 23741 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGGATCCATCTTAAAGCCCAATCG 23800 Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTA 14132 | || | || || || | ||| ||||| || || |||| | |||||| Sbjct 23801 GCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA 23860 Query 14133 G--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCA 14190 | | ||||| |||| ||||| || | ||| || |||||||||| || ||||| | Sbjct 23861 GGGTCCTTGA--TGTAGGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAA 23918 Query 14191 TAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATC 14250 | || || ||||| || || | | || || | ||| ||||| | | | || Sbjct 23919 TCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGT 23978 Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14310 |||| |||| ||||||||||| ||||| ||| ||| || ||||| || | | | Sbjct 23979 TTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGG 24038 Query 14311 TAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATC--GGATAAATCCTTAGA 14365 ||| || || ||| | | ||| | | || ||||| || |||| ||||||||| Sbjct 24039 AAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAT--ATCCTTAGA 24096 Query 14366 AAGATCTACTTCATCAACTGTCCAAAAA 14393 | ||| | ||| ||| | ||||| ||| Sbjct 24097 CAAATCAATTTCTTCAGCGGTCCAGAAA 24124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479710286043600