Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1779 149 6e-31 >seq1779 Length=49459 Score = 149 bits (164), Expect = 6e-31 Identities = 542/841 (64%), Gaps = 17/841 (2%) Strand=Plus/Plus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || |||||||| ||| Sbjct 23291 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 23350 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || |||||||| |||||||| || ||| | ||| | | ||| | Sbjct 23351 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 23409 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| || || | ||||||| ||||| |||||| || Sbjct 23410 GTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 23469 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 23470 AGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 23525 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || |||| | || | || | || Sbjct 23526 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAAT 23585 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | || || ||||| || || | || || ||||||| || | ||||| Sbjct 23586 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 23645 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || | Sbjct 23646 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 23705 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| || || | || |||| || ||||| || | ||||| ||| |||||| | | Sbjct 23706 AACCGGAGAAAAAGACACCTTCAATGGCGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 23765 Query 13826 CTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 13885 | | || | |||||| || |||||| || | || | || || | Sbjct 23766 CGTCAGCGTCTTGGATCCATCTTAAAGCCCAATCGGCCTTCTCACCGATTTCTGGGATGG 23825 Query 13886 TTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 13943 | | || |||||||| || ||| | ||||||| | ||||| |||| ||||| || Sbjct 23826 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAGGTATCGAT 23883 Query 13944 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003 | ||| || |||||||||| || ||||| || || || ||||| || |||| Sbjct 23884 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 23943 Query 14004 TCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT 14063 | || |||| ||| || || | | | || |||| ||||||||||||||||||| Sbjct 23944 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 24003 Query 14064 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14123 ||| ||| ||| || ||||| || | | | ||| || || ||| | | ||| Sbjct 24004 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTT 24063 Query 14124 GAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| || Sbjct 24064 CATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 24123 Query 14181 A 14181 | Sbjct 24124 A 24124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478571128108560