Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq804 185 1e-41 >seq804 Length=127643 Score = 185 bits (204), Expect = 1e-41 Identities = 883/1388 (64%), Gaps = 38/1388 (3%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 53504 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 53563 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 53564 GCAGTAGGCATCGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 53623 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 53624 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 53682 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 53683 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 53742 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 53743 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 53802 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 53803 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 53862 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 53863 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 53922 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 53923 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 53982 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 53983 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 54039 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 54040 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 54099 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 54100 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 54159 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 54160 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 54219 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 54220 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 54276 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 54277 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 54333 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 54334 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 54393 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 54394 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 54453 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 116899 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 54454 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 54513 Query 116900 TGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | | |||| |||||| ||||| | || || || || || |||| ||| |||| Sbjct 54514 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 54572 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCG 117018 | | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 54573 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTA 54631 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | || Sbjct 54632 TGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTG 54691 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| Sbjct 54692 TCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGA 54751 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 117197 || |||| ||||| || ||||| | ||||| | |||| || || ||| || | || Sbjct 54752 GGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGT-GAGTAAAATATTTTAGAGA 54810 Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257 |||| | || || || || ||| ||| ||| ||||| || || | || ||| Sbjct 54811 CATCAAGTTATACGTTTCTAAAGCAGCCTCAATATCTCTACCGTGGATGCCTAGTGCGAC 54870 Query 117258 CCGCATAA 117265 | ||||| Sbjct 54871 TCTCATAA 54878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613484546246640