Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1779 93.3 8e-14 >seq1779 Length=49459 Score = 93.3 bits (102), Expect = 8e-14 Identities = 349/533 (65%), Gaps = 17/533 (3%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571 ||||||||| ||||| |||||| || | ||||| || | | |||| || | || Sbjct 24121 CTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAA 24062 Query 25572 AGA---CGAGCAGCATTTTC---TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625 || |||| || ||||| || || || | || || || || || ||||| || Sbjct 24061 CGAGAACGAG-AGATTTTTCATTTCCAGA--GTTCTTGCCTTTTTCGCCGCTTCTGACGG 24005 Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 ||| || || || || || || | ||| ||| ||||| || ||||| || Sbjct 24004 TATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAA 23945 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 | |||||||||||||||| || || |||||| | |||||||| || || | | Sbjct 23944 GAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTT 23885 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| || ||||| | ||| || || || |||| |||||| | Sbjct 23884 GATCGAT-ACCTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACA 23826 Query 25805 ACATACCCAGCATCAAGAG-GAAGGCGCGGTGGGCCATGAAG-TGGATC-AACAGCCAGA 25861 ||| ||||| | | | |||||| || | || | | ||| |||||| || | | || Sbjct 23825 CCAT-CCCAGAAATCGGTGAGAAGGC-CGATTGGGCTTTAAGATGGATCCAAGACGCTGA 23768 Query 25862 GCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCG 25921 ||| |||||| || | || || |||||||| || | || || |||||||| || Sbjct 23767 -CGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCGCCATTGAAGGTGTCTTTTTCTCCG 23709 Query 25922 GTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTT 25981 |||| ||||| |||| |||||| | || ||| || | |||||||| | ||||| Sbjct 23708 GTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTT 23649 Query 25982 CCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||||||| | ||| | || ||||| ||| | |||| || ||||| ||| || Sbjct 23648 CCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTTG 23596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928810502405760