Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq804 194 2e-44 >seq804 Length=127643 Score = 194 bits (214), Expect = 2e-44 Identities = 883/1387 (64%), Gaps = 36/1387 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 53504 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 53563 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG-CGTTC 118300 || || ||||| ||||||||| | | || | | ||| | | | | || | || Sbjct 53564 GCAGTAGGCATCGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 53623 Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 ||| || | |||||| || | || | | | | ||||||||||||||| || Sbjct 53624 CTTAAG-GTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 53682 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 53683 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 53742 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | || || | || || ||||| || |||||||| || | ||| | Sbjct 53743 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 53802 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 ||| || || |||||||| | | || ||| || || || ||||||||||| Sbjct 53803 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 53862 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600 ||||| | ||||||| | |||||||||||| || || | || || || || || Sbjct 53863 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 53922 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 53923 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 53982 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 118705 |||| | | | | || ||||| |||| ||| || || || Sbjct 53983 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 54039 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 54040 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 54099 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| ||| |||||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 54100 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 54159 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||| ||||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 54160 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 54219 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 | ||| | | ||| | ||| || | || || |||| |||||| || Sbjct 54220 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 54276 Query 118946 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 119002 || || || |||||||| ||||| || | || | | || || | || || ||| Sbjct 54277 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 54333 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 54334 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 54393 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 54394 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 54453 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 119178 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 54454 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 54513 Query 119179 TACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | | |||| |||||| ||||| | |||||| || || ||||||| ||| |||| Sbjct 54514 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 54572 Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298 | | ||| | || || ||||| || ||| ||| | | | | | | | Sbjct 54573 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTAT 54632 Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 |||| || | ||||||||| || || || || || || || ||| | | || Sbjct 54633 GGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGT 54692 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||||| Sbjct 54693 CGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAG 54752 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGAC 119477 | | || ||||| || ||||| | ||||| | |||| || || ||| || | ||| Sbjct 54753 GTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGT-GAGTAAAATATTTTAGAGAC 54811 Query 119478 ATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 119537 ||| || || || || || | || ||| ||| ||||| || || | | ||| Sbjct 54812 ATCAAGTTATACGTTTCTAAAGCAGCCTCAATATCTCTACCGTGGATGCCTAGTGCGACT 54871 Query 119538 CGCATAA 119544 | ||||| Sbjct 54872 CTCATAA 54878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618412364280240