Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099395.1_202017-02- 08] 2,954 sequences; 11,750,911 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1779 136 4e-27 >seq1779 Length=49459 Score = 136 bits (150), Expect = 4e-27 Identities = 565/880 (64%), Gaps = 31/880 (4%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| ||||| || || ||| | ||||||| || || |||||||| | Sbjct 23296 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 23355 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTA--GAA---GTATTATATACAGCTTTA 23319 || || || |||||||| ||||| || || || || ||| ||| | | ||| Sbjct 23356 CAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG--TTA 23413 Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379 | | || || || || || || || || |||| ||||| ||| || ||| Sbjct 23414 CCGAAAGCGACC---AACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCA 23470 Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439 ||| ||||||| | ||||| | || || | ||| || || |||||| Sbjct 23471 GCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCC 23530 Query 23440 ACAGCATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496 ||||| || | |||| ||| |||||| || || ||| | || |||| Sbjct 23531 ACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGG 23587 Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 ||||| || |||||||| || || | ||||| || |||| |||||||| || Sbjct 23588 GCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTG 23647 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 ||||| ||||| || ||||| | |||| ||||| | ||| || || | ||||| || Sbjct 23648 GAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAA 23707 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 ||||| || || | ||| |||| || |||||||| || || | | |||||| || Sbjct 23708 CCGGAGAAAAAGACACCTTCAATGGCGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCG 23767 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----AT 23732 | | || |||||| || | ||||| |||||| | || | | || Sbjct 23768 TCAGCGTCTTGGATCCATCTTAAAGCCCAATCGGCCTTC----TCACCGATTTCTGGGAT 23823 Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAAT 23792 || | ||| || || || | || |||||| | || | || || ||||| || Sbjct 23824 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGAT 23883 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 | || || ||||||| |||||||||||||| || || || || || |||| Sbjct 23884 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 23943 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | || || | | ||| || || | | || ||| | | || ||||| |||||||| Sbjct 23944 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 24003 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAG 23968 ||| ||| ||| || || || |||||||| || ||||| ||| ||| || | Sbjct 24004 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-G 24061 Query 23969 TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027 || || | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| Sbjct 24062 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 24121 Query 24028 AAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 ||| || ||||||||| || | |||| || |||| Sbjct 24122 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 24161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521468744055600