Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02-
08] 1,080 sequences; 11,540,941 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq389 241 1e-58
seq603 179 3e-40
seq708 170 2e-37
seq639 105 6e-18
seq337 96.9 3e-15
>seq389
Length=64149
Score = 241 bits (266), Expect = 1e-58
Identities = 416/600 (69%), Gaps = 6/600 (1%)
Strand=Plus/Minus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
||| || || |||| |||||||| || ||||||||||| ||||| || | || ||
Sbjct 9845 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 9786
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| |||||||| ||| |||||| | | ||| | ||| || || | || ||||||||
Sbjct 9785 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 9726
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || ||||||| ||||||||| || ||||| ||||| || ||||| || || |||||
Sbjct 9725 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACG 9666
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
||| ||||| ||| | || | | ||| || | | |||||| || | ||| | ||
Sbjct 9665 GGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACC 9606
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | ||||| ||| |||| ||| || | || | ||| || || || | |
Sbjct 9605 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 9546
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
||| || |||| || |||| |||| |||||||| || |||||||| |||||| ||
Sbjct 9545 TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTT 9486
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || ||||||||||| || |||||||| | ||| || ||| |||| ||||| ||
Sbjct 9485 CATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGT 9426
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| |||||| ||| | ||| ||||| | || ||||| || | || || ||
Sbjct 9425 TGGAGAGGCGTGAGTATAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTC 9366
Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
|| | |||| ||||| || || | ||||| | ||| || | | ||| || | |||
Sbjct 9365 GATAT-CTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGG 9307
Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | ||| ||||| ||| | | | ||| ||||||| || |||||||| ||||||||
Sbjct 9306 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 9249
>seq603
Length=89307
Score = 179 bits (198), Expect = 3e-40
Identities = 426/641 (66%), Gaps = 2/641 (0%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| ||| ||| |||| |||||||| || ||||||||||| ||||| || | || ||
Sbjct 29052 TTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACG 29111
Query 23401 CACCTCCTCTTTGCC-GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| || || || || ||||| ||| | | ||| | |||||| || | || |||||||
Sbjct 29112 AATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCC 29170
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519
| ||||| | | ||| ||| || || || |||||||| || || ||||| || || ||||
Sbjct 29171 ATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAAC 29230
Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579
|||| || || ||| | || | | ||| || | | ||||| || | ||| |
Sbjct 29231 GGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTAC 29290
Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639
| || | | |||||| | | || | ||||| | || | ||| | || || | |
Sbjct 29291 CAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAG 29350
Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699
||| || ||||| || |||| ||||| ||| || || || || ||||| ||| || |
Sbjct 29351 TTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCT 29410
Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759
| | || | |||||||| ||||||||||| | | |||||| | || ||| | |
Sbjct 29411 TCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAG 29470
Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819
| ||| ||||| || ||||||| |||||| | ||| || || | | | | |
Sbjct 29471 TTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATT 29530
Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
| || || || || ||||| | || || ||||| | || | ||||| | ||
Sbjct 29531 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 29590
Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939
|| | ||||| | | | | || || ||||| | || || || ||||| |||||
Sbjct 29591 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 29650
Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980
||| | || || | ||||| ||| |||||||| ||||||
Sbjct 29651 TATACTGGAAATCCCTATCGTACACGATGGCCGAGTTCAAA 29691
>seq708
Length=69013
Score = 170 bits (188), Expect = 2e-37
Identities = 547/836 (65%), Gaps = 21/836 (3%)
Strand=Plus/Minus
Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650
|| ||||| || || ||||||| |||||| | || ||||||||||| | || |||
Sbjct 31987 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 31928
Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707
| | | || || |||||| ||| ||| || | || |||||||||
Sbjct 31927 AACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCC 31868
Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767
|| || || ||||||||||| || || ||||| |||| || || ||||| ||| |
Sbjct 31867 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATT 31808
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| ||||| | | || ||||| || ||| | |||||||| | || || ||||
Sbjct 31807 CCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACT 31748
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886
|| || | | |||||||| ||| | |||||| | || || | | | |||||||
Sbjct 31747 TACTCCTTGTTGATCGATACTTACATCAAGGACCCTAAAGA-AAGTGAATTCTTGTTCAA 31689
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| || | || || || | |||| ||||||| || ||| | | | |||||| |
Sbjct 31688 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCA 31629
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| ||| ||| ||| | || || ||| | || || ||| || | |||||| | ||
Sbjct 31628 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTT 31569
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
|| || || |||||| | || || ||| |||| || | || |||||||||| |
Sbjct 31568 TTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTT 31509
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
|| ||| |||||| ||||| | | ||||| ||| | || || || ||||| ||| |
Sbjct 31508 AACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 31449
Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGCATCTTG--GACATTATCA 58182
||| | | || | || ||||| ||| | | |||| ||| | ||| |||
Sbjct 31448 GTTGTTCGCCCATTTGAAGAACAAACCAGACCCAGCCATCG----TTGAAAAAATTGTCA 31393
Query 58183 CCGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC 58241
||||||| || | || ||| || || | || || ||| |||| || || ||||
Sbjct 31392 CCGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCTTTGCTA 31334
Query 58242 GGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTC 58301
||||||||| ||| || ||| | ||| ||||||| || ||||||||||| ||| ||
Sbjct 31333 GGTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTC 31274
Query 58302 GAACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTG 58358
| || | || | | ||| ||| | |||| || || ||||| ||| |
Sbjct 31273 G--CT-TTCGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGATTTCATGGAAAAC 31217
Query 58359 ATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
||||| | | || ||||| ||||| |||||||| | |||| || || |||||
Sbjct 31216 ATCTCCTTGGCCGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAA 31161
>seq639
Length=22601
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 14156 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 14097
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 14096 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 14037
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| || ||| || ||| ||
Sbjct 14036 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 13977
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||||| || |||| | ||| |||| || |||
Sbjct 13976 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 13926
>seq337
Length=79302
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||| |||| || ||||| ||||| | || |||||| | |||
Sbjct 30587 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 30646
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || ||| |||||||||||| | || || || ||
Sbjct 30647 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 30706
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || ||| | |||||| || || || || || |||
Sbjct 30707 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 30766
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|| ||||| ||||| ||||||||
Sbjct 30767 ATCCAAAAGGAATCTACTCTTCA 30789
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || ||||| ||||| || || || ||| | || |||||| | |||
Sbjct 31009 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 31068
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | ||| || || ||||| | || || || ||
Sbjct 31069 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 31128
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || ||||| || || | ||||| || || || || || |||
Sbjct 31129 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 31188
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|| ||||| ||||| ||||||||
Sbjct 31189 ATCCAAAAGGAATCTACTCTTCA 31211
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||| |||| || ||||| || || | || |||||| | |||
Sbjct 30359 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 30418
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || || ||| ||||||||||| | || || || ||
Sbjct 30419 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 30478
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || || ||| | |||||| || || || ||||| |||
Sbjct 30479 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 30538
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || || | ||||| || || || || || || ||||
Sbjct 30539 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 30587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445760382153600
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