Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02- 08] 1,080 sequences; 11,540,941 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq337 152 5e-32 seq639 150 2e-31 >seq337 Length=79302 Score = 152 bits (168), Expect = 5e-32 Identities = 160/208 (77%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || | ||||||||||| || || | || || ||| || || Sbjct 30587 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 30646 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 30647 GACACGATCGATAACGTTAAGTCGAAA-ATCCAGGACAAGGAAGGTATCCCTCCAGATCA 30705 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||||||| || ||||| || || |||| | |||| || || || Sbjct 30706 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 30765 Query 24883 CATTCAAAAGGAATCGACACTACACTTG 24910 ||| ||||||||||| || || |||||| Sbjct 30766 CATCCAAAAGGAATCTACTCTTCACTTG 30793 Score = 129 bits (142), Expect = 5e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| ||||| || || ||||| || || || || ||| | || Sbjct 31009 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 31068 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| ||| || ||||| |||||||| || ||||| ||||| Sbjct 31069 GACACTATTGACAACGTCAAAAGTAAA-ATTCAAGATAAAGAAGGTATCCCTCCGGATCA 31127 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| ||||| || || || || || ||| |||| | |||| || || || Sbjct 31128 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 31187 Query 24883 CATTCAAAAGGAATCGACACTACACTTG 24910 ||| ||||||||||| || || |||||| Sbjct 31188 CATCCAAAAGGAATCTACTCTTCACTTG 31215 Score = 127 bits (140), Expect = 2e-24 Identities = 156/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||||||||| || || | ||||| ||| | || Sbjct 30359 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 30418 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | ||| || |||||||| ||||| || ||||| ||||| Sbjct 30419 GATACCATCGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGATCA 30477 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | |||||||||||||| || ||||| || || |||| |||| ||||| || Sbjct 30478 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 30537 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||| ||||| || || |||| |||| Sbjct 30538 CATTCAGAAGGAGTCCACCTTACATCTTG 30566 Score = 111 bits (122), Expect = 1e-19 Identities = 119/156 (76%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 24775 AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGAT 24834 |||| ||| | ||| || |||||||| ||||| || ||||| ||||||||| | ||||| Sbjct 30853 AACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGAT 30911 Query 24835 CTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGA 24894 |||||||| || || ||||| || |||| |||| |||||||||||||| || || Sbjct 30912 TTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGA 30971 Query 24895 ATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || | || ||||||||| ||||| | || || Sbjct 30972 GTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 31007 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/156 (73%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 24775 AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGAT 24834 |||| ||| | ||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct 31275 AACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGAT 31333 Query 24835 CTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGA 24894 |||||||| || || || || ||| |||| |||| || || || ||||||||||| Sbjct 31334 TTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGA 31393 Query 24895 ATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||| | || ||| | ||| | || || Sbjct 31394 GTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 31429 >seq639 Length=22601 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||||||||| |||||||| || ||||| ||| | | Sbjct 14154 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 14095 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 14094 TGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 14035 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| |||| || || || Sbjct 14034 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 13975 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || ||||||||||| ||| ||||| | || || || Sbjct 13974 CATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTGG 13924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891526382400