Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq851 122 2e-22 seq482 98.7 2e-15 seq65 91.5 3e-13 seq365 84.2 5e-11 >seq851 Length=109121 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || ||||||| ||| ||||||||| | || || ||| Sbjct 100649 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 100590 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 100589 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 100530 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| |||| || || |||||||| ||| Sbjct 100529 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 100470 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 100469 TTGGTCTTGAGA 100458 >seq482 Length=50272 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 206188 ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTA 206247 || || ||||| || || || || | || || ||| ||||||||| | || || Sbjct 50271 ACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAACGTT 50212 Query 206248 AAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCC 206307 ||| || |||||||| || ||||| ||| || ||| |||||| | || || ||| Sbjct 50211 AAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCC 50152 Query 206308 GGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 206367 || ||||| | |||||||| || || || | || ||||| | || || ||||| ||| Sbjct 50151 GGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTCCACT 50092 Query 206368 CTTCACCTTGTTTTGAG 206384 ||||||||||| ||||| Sbjct 50091 CTTCACCTTGTCTTGAG 50075 >seq65 Length=418 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206188 ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTA 206247 || || ||||| || || || || | || || ||| ||||||||| |||| || Sbjct 2 ACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATCGACAACGTT 61 Query 206248 AAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCC 206307 ||| || |||||||| || ||||| ||| || || |||||| | || || ||| Sbjct 62 AAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCC 121 Query 206308 GGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 206367 || ||||| ||||||| || || || || | ||||| ||| | |||||||||||||| Sbjct 122 GGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACG 181 Query 206368 CTTCACCTTGTTTTGAGA 206385 | || | || |||||| Sbjct 182 TTGCATTTGGTGTTGAGA 199 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 226 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 285 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| |||||||| || ||||| || ||| | || || Sbjct 286 CGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTT 345 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| | |||||||| || || ||| | || |||||| |||| || || || Sbjct 346 TGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATC 405 Query 206364 TACTCTTCAC 206373 |||||||||| Sbjct 406 TACTCTTCAC 415 >seq365 Length=31680 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||||| || || ||| || ||| Sbjct 31477 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 31536 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || || ||||| || || || || Sbjct 31537 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 31596 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| || Sbjct 31597 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 31656 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || || |||||||||||| Sbjct 31657 CAAAAGGAATCTACTCTTCAC 31677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181803886297757