Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq365 113 3e-20 seq65 107 1e-18 >seq365 Length=31680 Score = 113 bits (124), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || ||||| || || | |||||||| || | Sbjct 31246 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 31305 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || || |||| | |||| || ||||| |||||| | || |||||||| Sbjct 31306 GATACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 31364 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATT 23785 ||| | || || |||||||| || || || |||||| |||||| | | |||| Sbjct 31365 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCT----GATT 31420 Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||||| || || |||||||| |||||| | || ||||| | |||| || Sbjct 31421 ACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 31472 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || | || || ||||| |||||| | || ||||| ||| | Sbjct 31474 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 31533 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| | |||| | ||||| |||||| | || |||||||| Sbjct 31534 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 31592 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || || |||||||| || || || ||||||| | || || || ||||| Sbjct 31593 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 31652 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| || || || Sbjct 31653 CATCCAAAAGGAATCTAC 31670 >seq65 Length=418 Score = 107 bits (118), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 23629 ACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATT 23687 || || || || || || || || || || ||||| || | |||||| | || || || Sbjct 2 ACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATCGACAACGTT 61 Query 23688 AAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGC 23747 || | |||| || ||||| |||||| | || ||||||||||| | || || ||||| Sbjct 62 AAGTCGAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGC 120 Query 23748 CGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATTACAACATACAAAAAGAGT 23803 ||| || |||||||||||| |||||| | | ||||| ||||| || ||||||| Sbjct 121 CGGTAAGCAACTGGAAGACGGTAGAACGCTGTCT----GATTATAACATTCAGAAAGAGT 176 Query 23804 CCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || || ||||| || || || ||| |||| || Sbjct 177 CTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338004998527436