Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq2928 138 7e-28 >seq2928 Length=1541 Score = 138 bits (152), Expect = 7e-28 Identities = 330/492 (67%), Gaps = 13/492 (3%) Strand=Plus/Plus Query 8178 GCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAA 8237 ||||||||||||| |||||||||| ||| || ||| || | ||| ||||| || | Sbjct 679 GCTCGTTGGCCGCCGTGGTGACCACGCTATGCACCAGACCCGAGTCGGCGTCGACGCCGA 738 Query 8238 TGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGAT 8297 |||||||||||||| || | ||| | ||||| ||||| ||||||||||||||||| | Sbjct 739 CATGGGCCTTCATGCCGAAATACCAGTCGTTGCCCTTCTTCGTCTGATGCATCTCCGGGT 798 Query 8298 CGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCA 8357 | || || | | |||||| || || | ||||| | ||| || ||||| |||| Sbjct 799 CACGGCTCTTCCCGGCGTTCTTCGTGGACGGCGCAGCCTCGAAGATCGTCGCATCCACCA 858 Query 8358 AGGTGCCTTGAGTCATCATGACGCCTGC-TTCGGCCAGCCAGCGAT--TGATGGTCTTGA 8414 ||||||| ||||||| | ||| || ||| || | |||| ||| | || Sbjct 859 GCGTGCCTTCCTTCATCATCA-GCCCGCGCTCGCACAAC--TCGATGCCGATCTCGTCGA 915 Query 8415 ACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGTGGTGC 8474 ||| | || | |||| |||| |||||||| | ||||| |||| | |||||| Sbjct 916 ACAGCTTTCGCGTCAGTGCGTGCTCGACCAGCAGGCGCCGGAATTTCAACAGCGTGGTGG 975 Query 8475 GGTCCGGCAAG---GCGCTATCCAGG--GATAACCGGGCAAACAGACGCATGGAGGCGAT 8529 |||||||| | ||| ||||| ||| || || || ||||| | | | | Sbjct 976 CGTCCGGCACGTTCTCGCGCGCCAGGTCGATGCCC--GCGAAGGCGCGCATCGCGATGCT 1033 Query 8530 TTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAGTG 8589 ||||| || |||||||| | | | | || || |||||| ||||||| ||| Sbjct 1034 GTCGTAGAGCGCATCTTCAAGCCCTTCGTCCGACAACCCGTACCACTGCTGCAGCAAGTA 1093 Query 8590 AATGCGTAGCATGGTTTCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAA 8649 || || ||||| |||||| | || |||||||| | |||| |||||| | Sbjct 1094 GATCCGCAGCATCCGTTCCAGGCCAATCGGCGGCCGGCCACGCTCGCCCTTCGGGTAATA 1153 Query 8650 CGGCTCGATGAC 8661 |||| |||| || Sbjct 1154 CGGCCCGATCAC 1165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303192714474216